PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG072270.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 348aa MW: 37467.7 Da PI: 5.1483

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG072270.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.3	2.1e-11	174	216	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L TRIDC7BG072270.2 174 MAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 216 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MELDEQAFLE ELFSLRRDAT AAWECNAMGD FFSPACGAGA AGMDCFQERH QPTVSVLPTF 60 TASFEQPHPQ QHEQHQHAAA VASGGFDCLS EVYGGGPFPN AVAGGYGEMG FLAAMDPKAA 120 LAAEGTGLGA CKVEPGLAAA VDGGAFGPGP MAALPPGPAS RKKRVEGMPS KNLMAERRRR 180 KRLNDRLSML RSVVPKISKM DRTSILGDTI DYMKELLERI RRLQEEMEEA CPHQHPGPAA 240 AAAAPLLSVF RELNPNEMLA RNTPKFEVER KEEGDTRVEV YCAAKPGLLL STVGTLDTLG 300 LDIQQCVVSC FNDFAMHASC SEMQREMISA DAIKQELFKN AGYGGGCL

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MELDEQAFLE ELFSLRRDAT AAWECNAMGD FFSPACGAGA AGMDCFQERH QPTVSVLPTF  60
TASFEQPHPQ QHEQHQHAAA VASGGFDCLS EVYGGGPFPN AVAGGYGEMG FLAAMDPKAA  120
LAAEGTGLGA CKVEPGLAAA VDGGAFGPGP MAALPPGPAS RKKRVEGMPS KNLMAERRRR  180
KRLNDRLSML RSVVPKISKM DRTSILGDTI DYMKELLERI RRLQEEMEEA CPHQHPGPAA  240
AAAAPLLSVF RELNPNEMLA RNTPKFEVER KEEGDTRVEV YCAAKPGLLL STVGTLDTLG  300
LDIQQCVVSC FNDFAMHASC SEMQREMISA DAIKQELFKN AGYGGGCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	161	182	RKKRVEGMPSKNLMAERRRRKR
2	162	183	RKKRVEGMPSKNLMAERRRRKR
3	176	183	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	6e-65	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG072270.2