PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG070030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 302aa MW: 32492.1 Da PI: 7.0348 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.5 | 1.3e-17 | 12 | 57 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEd l ++v+ +G ++W++I r ++ gR++k+c++rw + TRIDC7BG070030.1 12 RGPWSPEEDGALRQLVEHHGARNWTAIGRGVP-GRSGKSCRLRWCNQ 57 89******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 49.8 | 8.1e-16 | 64 | 106 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r ++T++Ed +++a+++lG++ W++Iar + gRt++ +k++w+ TRIDC7BG070030.1 64 RRPFTADEDAAIARAHARLGNR-WAAIARLLR-GRTDNAVKNHWN 106 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
DSYKMEGCER IRGPWSPEED GALRQLVEHH GARNWTAIGR GVPGRSGKSC RLRWCNQLSP 60 GVERRPFTAD EDAAIARAHA RLGNRWAAIA RLLRGRTDNA VKNHWNCSLK RRLGDLGADG 120 VAEGDQEERP CKRASFTPES TSGSGSGSGS GSDRSDLSHG GVFALGQVYR PVARAGGFEP 180 ADCAMSQRHE EEEQEDPFTS LSLSLPGTDA HAFHHDISTS RFHEPSPSPS PPPAPASATA 240 PPASSYPFSP EFAALMQEMI RDEVCRYISG VSCGANLPSM PQLVNGVMRA AAERAGGVSM 300 MR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50060.1 | 1e-51 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG070030.1 |