PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG068610.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 1026aa MW: 111265 Da PI: 8.0945

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG068610.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	18.1	5.9e-06	413	430	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG H+C+ +CHeG+CppC TRIDC7BG068610.3 413 CGLHRCKGTCHEGECPPC 430 ****************** PP
2	zf-NF-X1	16.6	1.7e-05	618	634	1	17
zf-NF-X1 1 CGkHkCqklCHeGpCpp 17 CG H C ++CH+ pC+p TRIDC7BG068610.3 618 CGLHACARPCHPSPCDP 634 ***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1026 aa Download sequence
XXXXXXXXXX XXYAPPHHRD SAAPLLPLPN PNPNPAPDSR PPPRRQRRPN HNNGRAPPPQ 60 ERAPPSAPAP RQMRANAPAY APRHERANAP APAPAAAAAG GGAVPQLVQE IQDKLARGAV 120 ECMICYDMVR RSAPVWSCGS CFSIFHLPCI RRWARSPASA SDDPASDAWR CPGCQSVQDV 180 PARDIAYTCF CRRRRDPPND LYLTPHSCGE PCSKPLDRAD PAAAKGNDDD DVAARCPHAC 240 VLQCHPGPCP PCKAFAPERP CPCGKQSITR RCADRSTPVT CGQPCEKLLP CRRHRCDKVC 300 HTGPCGECEV DYPAQCFCGK KTETLLCGEM VLKGKLSDKD GVFSCSEVCG HNLACANHAC 360 QDVCHPGPCG ECELVPEKVT TCHCGKTRLQ EKRTSCLDPI ATCDKVCDKR LPCGLHRCKG 420 TCHEGECPPC LVRVEQRCRC GSSGQMVECY KVSKEEFRCN KPCGRKKNCG RHRCSECCCP 480 LSKPFAQHQG DSMDPHFCQI PCGKKLRCGQ HGCQHLCHSG HCDPCRETIF NDLTCACGRS 540 SIPPPQPCGT PTPSCPHQCI VPQPCGHPAS HQCHFGDCPP CVVPVMRECV GGHVMLRNIP 600 CGSKDIRCNQ PCGKNRQCGL HACARPCHPS PCDPPPANGE ASSGSGGKVS CGQLCGVPRR 660 ECKHTCNAPC HPSSPCPDVR CEHRATITCS CGRISTTVPC SAGGAYNGDS TFDISVMQQL 720 PMALQPVESN GKRVPLGQRK LCCDEECAKV ERKRVLAEAF DITPPNLDAL HFGENSNASD 780 LVSDLFRREP KWVLAIEERC KFLVLGKTRG NSSSNMKFHV FCPMLKDKRD AIRLIADRWK 840 LSVQAVGWEP KRFVTVHVTP KSKVPARVLG SKPGVPVSAA HPYFDSMVDM DPRLVVAMLD 900 LPRDADVNSL VLRFGGECEL VWLNDKNAAA VFSDPARAAT ALRRLDYGSA YQGAAMFCPS 960 SITQASLSSN VWVGAPRDGG LATASSASAW KKDSPSEDKC AWSFPRISVE TCCSGHEFKP 1020 VECSGA

Sequence ? help Back to Top

Protein Sequence Length: 1026 aa Download sequence

XXXXXXXXXX XXYAPPHHRD SAAPLLPLPN PNPNPAPDSR PPPRRQRRPN HNNGRAPPPQ  60
ERAPPSAPAP RQMRANAPAY APRHERANAP APAPAAAAAG GGAVPQLVQE IQDKLARGAV  120
ECMICYDMVR RSAPVWSCGS CFSIFHLPCI RRWARSPASA SDDPASDAWR CPGCQSVQDV  180
PARDIAYTCF CRRRRDPPND LYLTPHSCGE PCSKPLDRAD PAAAKGNDDD DVAARCPHAC  240
VLQCHPGPCP PCKAFAPERP CPCGKQSITR RCADRSTPVT CGQPCEKLLP CRRHRCDKVC  300
HTGPCGECEV DYPAQCFCGK KTETLLCGEM VLKGKLSDKD GVFSCSEVCG HNLACANHAC  360
QDVCHPGPCG ECELVPEKVT TCHCGKTRLQ EKRTSCLDPI ATCDKVCDKR LPCGLHRCKG  420
TCHEGECPPC LVRVEQRCRC GSSGQMVECY KVSKEEFRCN KPCGRKKNCG RHRCSECCCP  480
LSKPFAQHQG DSMDPHFCQI PCGKKLRCGQ HGCQHLCHSG HCDPCRETIF NDLTCACGRS  540
SIPPPQPCGT PTPSCPHQCI VPQPCGHPAS HQCHFGDCPP CVVPVMRECV GGHVMLRNIP  600
CGSKDIRCNQ PCGKNRQCGL HACARPCHPS PCDPPPANGE ASSGSGGKVS CGQLCGVPRR  660
ECKHTCNAPC HPSSPCPDVR CEHRATITCS CGRISTTVPC SAGGAYNGDS TFDISVMQQL  720
PMALQPVESN GKRVPLGQRK LCCDEECAKV ERKRVLAEAF DITPPNLDAL HFGENSNASD  780
LVSDLFRREP KWVLAIEERC KFLVLGKTRG NSSSNMKFHV FCPMLKDKRD AIRLIADRWK  840
LSVQAVGWEP KRFVTVHVTP KSKVPARVLG SKPGVPVSAA HPYFDSMVDM DPRLVVAMLD  900
LPRDADVNSL VLRFGGECEL VWLNDKNAAA VFSDPARAAT ALRRLDYGSA YQGAAMFCPS  960
SITQASLSSN VWVGAPRDGG LATASSASAW KKDSPSEDKC AWSFPRISVE TCCSGHEFKP  1020
VECSGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG068610.3