PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7BG065830.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 410aa MW: 46117.4 Da PI: 6.5643

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG065830.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	42.2	2.6e-13	48	127	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF + ks+ + +++ t+++ vC ++gk+e e+++ + r++C +++ + +d+ w++t+ +++HnH+l+ TRIDC7BG065830.5 48 DFYNLYSWEIGFGIGYGKSRLN-AQRTKTMQEIVCGCSGKTEAENSR---------SCRCECPVLIRLLRASDNSWYITEHRENHNHSLS 127 6***************9998.45558999*****9987655.........8999999999999999*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
EVRRQTARHV HRMTALELTI RKYAEQPDKS VMRPALGLSF DSLGEAYDFY NLYSWEIGFG 60 IGYGKSRLNA QRTKTMQEIV CGCSGKTEAE NSRSCRCECP VLIRLLRASD NSWYITEHRE 120 NHNHSLSLTM GEKVHCPSHK HIDVYTKDLI RQLRENNVNL GKPWFFDWMD YGTYNVEQHT 180 VPRISLYTAE ICTRLIYVTR EYPDIFPTKP HDEFDHLDED WHDVVGEPGG ILQHEGQREA 240 LRAAEALIAA IQQDCTTPEG RRGKQGAGGD TDTNTLNDKG KGVADESSDS SSSDSDDERV 300 DPSIRLARPI LRADRRGESI DAPPTSVRIP GVVGGNRVTG PRSLNRFRQR LLVGSNNTRG 360 AAASNASALV VNPDRHALLR SRGEHLRAEL SEIEAQAKSD LECESFINVF

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

EVRRQTARHV HRMTALELTI RKYAEQPDKS VMRPALGLSF DSLGEAYDFY NLYSWEIGFG  60
IGYGKSRLNA QRTKTMQEIV CGCSGKTEAE NSRSCRCECP VLIRLLRASD NSWYITEHRE  120
NHNHSLSLTM GEKVHCPSHK HIDVYTKDLI RQLRENNVNL GKPWFFDWMD YGTYNVEQHT  180
VPRISLYTAE ICTRLIYVTR EYPDIFPTKP HDEFDHLDED WHDVVGEPGG ILQHEGQREA  240
LRAAEALIAA IQQDCTTPEG RRGKQGAGGD TDTNTLNDKG KGVADESSDS SSSDSDDERV  300
DPSIRLARPI LRADRRGESI DAPPTSVRIP GVVGGNRVTG PRSLNRFRQR LLVGSNNTRG  360
AAASNASALV VNPDRHALLR SRGEHLRAEL SEIEAQAKSD LECESFINVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	6e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG065830.5