PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG065830.39 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 407aa MW: 45620.9 Da PI: 6.6737 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 42.3 | 2.5e-13 | 53 | 132 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF + ks+ + +++ t+++ vC ++gk+e e+++ + r++C +++ + +d+ w++t+ +++HnH+l+ TRIDC7BG065830.39 53 DFYNLYSWEIGFGIGYGKSRLN-AQRTKTMQEIVCGCSGKTEAENSR---------SCRCECPVLIRLLRASDNSWYITEHRENHNHSLS 132 6*****************9998.45558999*********9987655.........8999999999999999***************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 407 aa Download sequence |
AGCVLEVRRQ TARHVHRMTA LELTIRKYAE QPDKSVMRPA LGLSFDSLGE AYDFYNLYSW 60 EIGFGIGYGK SRLNAQRTKT MQEIVCGCSG KTEAENSRSC RCECPVLIRL LRASDNSWYI 120 TEHRENHNHS LSLTMGEKVH CPSHKHIDVY TKDLIRQLRE NNVNLGKPWF FDWMDYGTYN 180 VEQHTVPRIS LYTAEICTRL IYVTREYPDI FPTKPHDEFD HLDEDWHDVV GEPGGILQHE 240 GQREALRAAE ALIAAIQQDC TTPEGRRGKQ GAGGDTDTNT LNDKGKGVAD ESSDSSSSDS 300 DDERVDPSIR LARPILRADR RGESIDAPPT SVRIPGVVGG NRVTGPRSLN RFRQRLLVGS 360 NNTRGAAASN ASALVVNPDR HALLRSRGEH LRAELSEIEA QAKSDLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52520.1 | 7e-10 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG065830.39 |