PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG065830.38

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 400aa MW: 45506.1 Da PI: 6.3936

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG065830.38	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	42.3	2.5e-13	53	132	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF + ks+ + +++ t+++ vC ++gk+e e+++ + r++C +++ + +d+ w++t+ +++HnH+l+ TRIDC7BG065830.38 53 DFYNLYSWEIGFGIGYGKSRLN-AQRTKTMQEIVCGCSGKTEAENSR---------SCRCECPVLIRLLRASDNSWYITEHRENHNHSLS 132 6***************9998.45558999*****9987655.........8999999999999999*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
AGCVLEVRRQ TARHVHRMTA LELTIRKYAE QPDKSVMRPA LGLSFDSLGE AYDFYNLYSW 60 EIGFGIGYGK SRLNAQRTKT MQEIVCGCSG KTEAENSRSC RCECPVLIRL LRASDNSWYI 120 TEHRENHNHS LSLTMGEKVH CPSHKHIDVY TKDLIRQLRE NNVNLGKVYN IIGSFFGSVE 180 KVPFTKRTLR NIRGKINREQ ADDDVQKTLE SDLKNCDVFF ICWVSGLLKF DLTSVVLLLL 240 HVSQPWFFDW MDYGTYNVEQ HTVPRISLYT AEICTRLIYV TREYPDIFPT KPHDEFDHLD 300 EDWHDVVGEP GGILQHEGQR EALRAAEALI AAIQQDCTTP EGRRGKQGAG GDTDTNTLND 360 KGKGVADESS DSSSSDSDDE RVDPSIRLAR PILRADRRGF

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

AGCVLEVRRQ TARHVHRMTA LELTIRKYAE QPDKSVMRPA LGLSFDSLGE AYDFYNLYSW  60
EIGFGIGYGK SRLNAQRTKT MQEIVCGCSG KTEAENSRSC RCECPVLIRL LRASDNSWYI  120
TEHRENHNHS LSLTMGEKVH CPSHKHIDVY TKDLIRQLRE NNVNLGKVYN IIGSFFGSVE  180
KVPFTKRTLR NIRGKINREQ ADDDVQKTLE SDLKNCDVFF ICWVSGLLKF DLTSVVLLLL  240
HVSQPWFFDW MDYGTYNVEQ HTVPRISLYT AEICTRLIYV TREYPDIFPT KPHDEFDHLD  300
EDWHDVVGEP GGILQHEGQR EALRAAEALI AAIQQDCTTP EGRRGKQGAG GDTDTNTLND  360
KGKGVADESS DSSSSDSDDE RVDPSIRLAR PILRADRRGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	7e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG065830.38