PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7BG065830.31

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 473aa MW: 53208.7 Da PI: 6.7161

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG065830.31	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	41.9	3.2e-13	42	121	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF + ks+ + +++ t+++ vC ++gk+e e+++ + r++C +++ + +d+ w++t+ +++HnH+l+ TRIDC7BG065830.31 42 DFYNLYSWEIGFGIGYGKSRLN-AQRTKTMQEIVCGCSGKTEAENSR---------SCRCECPVLIRLLRASDNSWYITEHRENHNHSLS 121 6***************9998.45558999*****9987655.........8999999999999999*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
ARHVHRMTAL ELTIRKYAEQ PDKSVMRPAL GLSFDSLGEA YDFYNLYSWE IGFGIGYGKS 60 RLNAQRTKTM QEIVCGCSGK TEAENSRSCR CECPVLIRLL RASDNSWYIT EHRENHNHSL 120 SLTMGEKVHC PSHKHIDVYT KDLIRQLREN NVNLGKVYNI IGSFFGSVEK VPFTKRTLRN 180 IRGKINREQA DDDVQKTLES DLKNCDVFFI CWVSGLLKFD LTSVVLLLLH VSQPWFFDWM 240 DYGTYNVEQH TVPRISLYTA EICTRLIYVT REYPDIFPTK PHDEFDHLDE DWHDVVGEPG 300 GILQHEGQRE ALRAAEALIA AIQQDCTTPE GRRGKQGAGG DTDTNTLNDK GKGVADESSD 360 SSSSDSDDER VDPSIRLARP ILRADRRGES IDAPPTSVRI PGVVGGNRVT GPRSLNRFRQ 420 RLLVGSNNTR GAAASNASAL VVNPDRHALL RSRGEHLRAE LSEIEAQAKS DLE

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

ARHVHRMTAL ELTIRKYAEQ PDKSVMRPAL GLSFDSLGEA YDFYNLYSWE IGFGIGYGKS  60
RLNAQRTKTM QEIVCGCSGK TEAENSRSCR CECPVLIRLL RASDNSWYIT EHRENHNHSL  120
SLTMGEKVHC PSHKHIDVYT KDLIRQLREN NVNLGKVYNI IGSFFGSVEK VPFTKRTLRN  180
IRGKINREQA DDDVQKTLES DLKNCDVFFI CWVSGLLKFD LTSVVLLLLH VSQPWFFDWM  240
DYGTYNVEQH TVPRISLYTA EICTRLIYVT REYPDIFPTK PHDEFDHLDE DWHDVVGEPG  300
GILQHEGQRE ALRAAEALIA AIQQDCTTPE GRRGKQGAGG DTDTNTLNDK GKGVADESSD  360
SSSSDSDDER VDPSIRLARP ILRADRRGES IDAPPTSVRI PGVVGGNRVT GPRSLNRFRQ  420
RLLVGSNNTR GAAASNASAL VVNPDRHALL RSRGEHLRAE LSEIEAQAKS DLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	9e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG065830.31