PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG065830.25

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 403aa MW: 45867.6 Da PI: 6.3936

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG065830.25	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	42.3	2.5e-13	56	135	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF + ks+ + +++ t+++ vC ++gk+e e+++ + r++C +++ + +d+ w++t+ +++HnH+l+ TRIDC7BG065830.25 56 DFYNLYSWEIGFGIGYGKSRLN-AQRTKTMQEIVCGCSGKTEAENSR---------SCRCECPVLIRLLRASDNSWYITEHRENHNHSLS 135 6***************9998.45558999*****9987655.........8999999999999999*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MLSTGCVLEV RRQTARHVHR MTALELTIRK YAEQPDKSVM RPALGLSFDS LGEAYDFYNL 60 YSWEIGFGIG YGKSRLNAQR TKTMQEIVCG CSGKTEAENS RSCRCECPVL IRLLRASDNS 120 WYITEHRENH NHSLSLTMGE KVHCPSHKHI DVYTKDLIRQ LRENNVNLGK VYNIIGSFFG 180 SVEKVPFTKR TLRNIRGKIN REQADDDVQK TLESDLKNCD VFFICWVSGL LKFDLTSVVL 240 LLLHVSQPWF FDWMDYGTYN VEQHTVPRIS LYTAEICTRL IYVTREYPDI FPTKPHDEFD 300 HLDEDWHDVV GEPGGILQHE GQREALRAAE ALIAAIQQDC TTPEGRRGKQ GAGGDTDTNT 360 LNDKGKGVAD ESSDSSSSDS DDERVDPSIR LARPILRADR RGF

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MLSTGCVLEV RRQTARHVHR MTALELTIRK YAEQPDKSVM RPALGLSFDS LGEAYDFYNL  60
YSWEIGFGIG YGKSRLNAQR TKTMQEIVCG CSGKTEAENS RSCRCECPVL IRLLRASDNS  120
WYITEHRENH NHSLSLTMGE KVHCPSHKHI DVYTKDLIRQ LRENNVNLGK VYNIIGSFFG  180
SVEKVPFTKR TLRNIRGKIN REQADDDVQK TLESDLKNCD VFFICWVSGL LKFDLTSVVL  240
LLLHVSQPWF FDWMDYGTYN VEQHTVPRIS LYTAEICTRL IYVTREYPDI FPTKPHDEFD  300
HLDEDWHDVV GEPGGILQHE GQREALRAAE ALIAAIQQDC TTPEGRRGKQ GAGGDTDTNT  360
LNDKGKGVAD ESSDSSSSDS DDERVDPSIR LARPILRADR RGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	6e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG065830.25