PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG065830.18
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 247aa    MW: 28069.8 Da    PI: 8.0316
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG065830.18genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR143.51e-1336115190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                        +fYn Y+ e+GF +   ks+ +  +++ t+++ vC ++gk+e e+++         + r++C   +++ + +d+ w++t+ +++HnH+l+
  TRIDC7BG065830.18  36 DFYNLYSWEIGFGIGYGKSRLN-AQRTKTMQEIVCGCSGKTEAENSR---------SCRCECPVLIRLLRASDNSWYITEHRENHNHSLS 115
                        6*****************9998.45558999*********9987655.........8999999999999999***************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MTALELTIRK YAEQPDKSVM RPALGLSFDS LGEAYDFYNL YSWEIGFGIG YGKSRLNAQR  60
TKTMQEIVCG CSGKTEAENS RSCRCECPVL IRLLRASDNS WYITEHRENH NHSLSLTMGE  120
KVHCPSHKHI DVYTKDLIRQ LRENNVNLGK VYNIIGSFFG SVEKVPFTKR TLRNIRGKIN  180
REQADDDVQK TLESDLKNSL VLRLDGLWDI QCGAAHSPTD QPLHSRNLHE AYICHEGVPG  240
HIPHKAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.11e-10FAR1 family protein