PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG065830.16

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 350aa MW: 40231.8 Da PI: 6.7794

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG065830.16	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	42.6	2e-13	36	115	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF + ks+ + +++ t+++ vC ++gk+e e+++ + r++C +++ + +d+ w++t+ +++HnH+l+ TRIDC7BG065830.16 36 DFYNLYSWEIGFGIGYGKSRLN-AQRTKTMQEIVCGCSGKTEAENSR---------SCRCECPVLIRLLRASDNSWYITEHRENHNHSLS 115 6***************9998.45558999*****9987655.........8999999999999999*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MTALELTIRK YAEQPDKSVM RPALGLSFDS LGEAYDFYNL YSWEIGFGIG YGKSRLNAQR 60 TKTMQEIVCG CSGKTEAENS RSCRCECPVL IRLLRASDNS WYITEHRENH NHSLSLTMGE 120 KVHCPSHKHI DVYTKDLIRQ LRENNVNLGK VYNIIGSFFG SVEKVPFTKR TLRNIRGKIN 180 REQADDDVQK TLESDLKNCD VFFICWVSGL LKFDLTSVVL LLLHVSQPWF FDWMDYGTYN 240 VEQHTVPRIS LYTAEICTRL IYVTREYPDI FPTKPHDEFD HLDEDWHDVV GEPGGILQHE 300 GKMGALLDMQ DVCLGINVMV GRRNKVSLIR LSNYLSWYEK NRPTGGAPSS

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MTALELTIRK YAEQPDKSVM RPALGLSFDS LGEAYDFYNL YSWEIGFGIG YGKSRLNAQR  60
TKTMQEIVCG CSGKTEAENS RSCRCECPVL IRLLRASDNS WYITEHRENH NHSLSLTMGE  120
KVHCPSHKHI DVYTKDLIRQ LRENNVNLGK VYNIIGSFFG SVEKVPFTKR TLRNIRGKIN  180
REQADDDVQK TLESDLKNCD VFFICWVSGL LKFDLTSVVL LLLHVSQPWF FDWMDYGTYN  240
VEQHTVPRIS LYTAEICTRL IYVTREYPDI FPTKPHDEFD HLDEDWHDVV GEPGGILQHE  300
GKMGALLDMQ DVCLGINVMV GRRNKVSLIR LSNYLSWYEK NRPTGGAPSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	4e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG065830.16