PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG065830.13
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 262aa    MW: 29858 Da    PI: 8.4858
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG065830.13genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR143.41.1e-1356135190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                        +fYn Y+ e+GF +   ks+ +  +++ t+++ vC ++gk+e e+++         + r++C   +++ + +d+ w++t+ +++HnH+l+
  TRIDC7BG065830.13  56 DFYNLYSWEIGFGIGYGKSRLN-AQRTKTMQEIVCGCSGKTEAENSR---------SCRCECPVLIRLLRASDNSWYITEHRENHNHSLS 135
                        6*****************9998.45558999*********9987655.........8999999999999999***************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MLSTGCVLEV RRQTARHVHR MTALELTIRK YAEQPDKSVM RPALGLSFDS LGEAYDFYNL  60
YSWEIGFGIG YGKSRLNAQR TKTMQEIVCG CSGKTEAENS RSCRCECPVL IRLLRASDNS  120
WYITEHRENH NHSLSLTMGE KVHCPSHKHI DVYTKDLIRQ LRENNVNLGK VYNIIGSFFG  180
SVEKVPFTKR TLRNIRGKIN REQADDDVQK TLETLVLRLD GLWDIQCGAA HSPTDQPLHS  240
RNLHEAYICH EGVPGHIPHK AS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.12e-10FAR1 family protein