PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG063900.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

DBB

Protein Properties

Length: 342aa MW: 36352.5 Da PI: 9.1499

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG063900.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.6	3.9e-06	12	52	4	40
zf-B_box 4 rkCpeHee.kelqlfCedCqqllCedCllee.Hkg..Htvv 40 r+C +e ++ +C+dC +lC C H + H++v TRIDC7BG063900.3 12 RRCGACEGaAPAAVHCRDCAGYLCTGCDARPaHARagHERV 52 79***8688****************999977889875 PP
2	zf-B_box	22	3.3e-07	52	97	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e ++ C+ + lC+ C +H+ H +vp+ TRIDC7BG063900.3 52 VWVCEVCEVSPAAVTCKADAAVLCAACDADIHHAnplaerHVRVPI 97 689***999******************644588888988876 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MELRKYWGVG GRRCGACEGA APAAVHCRDC AGYLCTGCDA RPAHARAGHE RVWVCEVCEV 60 SPAAVTCKAD AAVLCAACDA DIHHANPLAE RHVRVPIAPI GSPEAAAVAA EAVPEQLRQH 120 GGMLNLNVEA GKEGGKMDYL FSDLVDPYLA VDFTRFAHAD SVVPSGVATA AVPAVVDLDF 180 ACGIPAKPPP TYRLFIGGRR GAGGHLRRRW ELRDRLHPAQ AAGVHARLHR GAAEPRREHA 240 AGVAGGHGVL DGAGASGGGD RRGQGGEADA VPGEEEEPPV REDHPVRVQE GLRRVAAARQ 300 GPLRQARRPG RRRRRLGRGG PCRAVFHLLL ARLRLRRRAV LL

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MELRKYWGVG GRRCGACEGA APAAVHCRDC AGYLCTGCDA RPAHARAGHE RVWVCEVCEV  60
SPAAVTCKAD AAVLCAACDA DIHHANPLAE RHVRVPIAPI GSPEAAAVAA EAVPEQLRQH  120
GGMLNLNVEA GKEGGKMDYL FSDLVDPYLA VDFTRFAHAD SVVPSGVATA AVPAVVDLDF  180
ACGIPAKPPP TYRLFIGGRR GAGGHLRRRW ELRDRLHPAQ AAGVHARLHR GAAEPRREHA  240
AGVAGGHGVL DGAGASGGGD RRGQGGEADA VPGEEEEPPV REDHPVRVQE GLRRVAAARQ  300
GPLRQARRPG RRRRRLGRGG PCRAVFHLLL ARLRLRRRAV LL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	307	314	RRPGRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24790.2	5e-18	DBB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG063900.3