PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG061390.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 266aa    MW: 29906.1 Da    PI: 8.8311
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG061390.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR139.12.5e-12133212190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ + GF +r +ks+ +  n++  +++ vC + gk+  e+++         + r++C a +++ ++kd+ w++++ +  HnH+l+
  TRIDC7BG061390.3 133 DFYNLYSWKKGFGIRYRKSRLN-VNRTKCMQEIVCGCAGKPIVENTR---------SCRCECPALIRLLRTKDNGWYIAEHRDGHNHALS 212
                       6****************99998.555678899*******99887555.........99******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MEFLLQPINR TLLEEVNESN GTMEPVRFPV AAPAEIPAPA PAGSSADGQI YRPEASGGDK  60
AQGSEHSIEQ LDPKTPGWMQ RVRVGAAAPG RPPCADRVTT LEKTVREFAE HPRDIVMMPK  120
IGTSFDTLGE AYDFYNLYSW KKGFGIRYRK SRLNVNRTKC MQEIVCGCAG KPIVENTRSC  180
RCECPALIRL LRTKDNGWYI AEHRDGHNHA LSQTYGQTIH WPSHKHIDVY SKDLVKQLRQ  240
NNVNLSKVYS IIGSFFGKME NVPFTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.16e-10FAR1 family protein