PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG057850.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 848aa    MW: 93852.4 Da    PI: 6.3616
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG057850.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.56.1e-2474175199
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        f+k+lt sd++++g +++p++ ae+        ++++++  +l  +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   
  TRIDC7BG057850.12  74 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-- 161
                        99*****************************96555544..8************************************************.. PP

                        SSSEE..EEEEE-S CS
                 B3  86 grsefelvvkvfrk 99 
                        ++++ +l+++++r+
  TRIDC7BG057850.12 162 WNDNNQLLLGIRRA 175
                        7777778**99997 PP
2Auxin_resp116.81.9e-38200283183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                        aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k
  TRIDC7BG057850.12 200 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDAVRWPNSHWRSVK 283
                        79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 848 aa     Download sequence    
AASTNKEIES QIPNYPNLPP QLICQLHNVT MHADAETDEV YAQMTLQPLN PQELKDPYLP  60
AELGTANKQP TNYFCKTLTA SDTSTHGGFS VPRRAAEKVF PPLDFTMQPP AQELFAKDLH  120
GNEWKFRHIF RGQPKRHLLT TGWSVFVSAK RLVAGDSVLF IWNDNNQLLL GIRRATRPQT  180
VMPSSVLSSD SMHIGLLAAA AHAASTNSRF TIFYNPRASP CEFVIPLAKY VKAVYHTRIS  240
VGMRFRMLFE TEESSVRRYM GTITGISDLD AVRWPNSHWR SVKVGWDEST AGERQPRVSL  300
WEIEPLTTFP MYPTPFPLRL KRPWPTGLPS LHGGKDDDLT SSLMWLRDSA NPGFQSLNFG  360
GAGMNPWMQP RLDASLLGLQ PDIYQTMAAA AFQDPTKMSP TMLQFQQPQN MVGRATPLLQ  420
SQILQQMQPQ FQQQSYLQNI NGATIQGQAQ SEFLQQQLQR CQSFNEQKPQ LLQQQESNQQ  480
QSQGMQVPQH QHMQQQKNMA NYQSAYSQLS PGPQSSPTAL QTALPFSQSQ SFPDTNMSSL  540
SPSGAPAMHN TLGPFSSETA SHLSMSRPTA VPVPDSWSSK RVAVESLIPS RPQSTTHMEQ  600
LSSTPPSIPQ SSALAPLPGR GCLVDQDGSS DPQNHLLFGV NIDSHSLLMQ GGLHDENDST  660
AMPYSTSNFL SPSQHDFSLD QTLNSSGCLD ESGYVPCSHT PDQVNQPPAT FVKVYKSGTY  720
GRSLDITKFS NYHELRRELG RLFGLEGQLE DPMRSGWQLV FVDREEDVLL VGDDPWQEFV  780
NSVSCIKILS PQEVQQMGKQ GLELLSSASG KRLGGGGGGS SCDDYASRQE SRSLSTGIAS  840
VGSVEVEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein