PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC7BG055030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 186aa MW: 19891.8 Da PI: 6.968 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.3 | 0.00062 | 135 | 173 | 11 | 54 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L +l+ + +K + a++L +A+ YI+ L TRIDC7BG055030.1 135 VRKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFL 173 57778889999999999998.....8****************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 186 aa Download sequence |
RPTNGELAND EERHKTLEGQ ALFPATTTGE GEEGDGSSAA GHIYSNTARH GSSLAGDEFQ 60 LVMSSPSPWS RGVQHYHHNT LQQQASSAST TSLGNNMLDF SNNGSPRECT STASGATFKK 120 ARTQEPSPAQ STVKVRKEKL GDRITALHQL VSPFGKTDTA SVLLEAIGYI RFLHGQIEKG 180 VQVQGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G29100.1 | 4e-26 | bHLH family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC7BG055030.1 |