PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG051640.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 347aa    MW: 37014.8 Da    PI: 4.497
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG051640.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.91.1e-16286322135
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++Cgt    Tp++Rrgp+g++tLCnaCGl+++ kg+
  TRIDC7BG051640.1 286 CHHCGTNAhnTPMMRRGPEGPRTLCNACGLMWANKGM 322
                       ******9999***********************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MAQHDGKPYQ PRRGPERPPQ PAEDPPAPAA APAAADAVID HLAAVAAEAE ALNASIAAVA  60
AEAEAMNAYE HAQEQEQEME EEEEEEEEEE EEEMEEDDDE GEGDGQHEHG QHGGNGESVP  120
MDAEAAAQAA AAAAACAPLD PHGAMVSAIV PPATGNQLTL SFQGEVYVFD SVSPDKVQAV  180
LLLLGGRELN PGIGAGASST PYSKRLNFPH RVASLMRFRE KRKERNFDKK IRYTVRKEVA  240
LRMQRNRGQF TSSKPKPDDG TSELATADGS PNWGSVEGRP PSAAACHHCG TNAHNTPMMR  300
RGPEGPRTLC NACGLMWANK GMLRDLSKST PPSLQMVSTG PNDSVDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.29e-74GATA family protein