PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG050440.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 354aa MW: 38373.6 Da PI: 9.4573 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 34.8 | 2.9e-11 | 5 | 26 | 3 | 25 |
S---SGGGGTS--TTTTT-SS-S CS zf-CCCH 3 telCrffartGtCkyGdrCkFaH 25 elCr+++r G CkyG++C+F H TRIDC7BG050440.6 5 PELCRNYQR-GSCKYGAQCRFVH 26 69*******.************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 354 aa Download sequence |
XXRRPELCRN YQRGSCKYGA QCRFVHANSN QQQQQQQAKP NPFGFGAGSR QQPQQPFGAQ 60 SQQFQQQQQK PNPFGFGVQG GAAQQRNEPG PAKPFQNKWV RDPSAPPTKQ AEAQPAPQAA 120 HTSCTDPESC RQQISDDFKN EAPLWKLTCY AHLRSGPCDI TGDISYEELR AKAYEEGKQG 180 KPMQSIVEGE RNLQNAKLTE FTNLLNKARA TPSFPTASSF PEVKNNSTFG SSQTNGPPVF 240 SSFNQLGAAT NFGSGPRTAA PGVPTNTIFG QPTQSTPSFG APTFGSTGMR FGVPVGSQTS 300 KQSFGSYQGS SMSSNSNFQN STSSGHHRDI DKQSVELLNG MTPRTSAMDQ APVE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75340.1 | 4e-51 | C3H family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG050440.6 |