PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7BG048500.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 231aa MW: 25315.5 Da PI: 7.6443

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG048500.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.6	1.3e-09	62	109	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN ++e L+el+P + sk a +Le+ +++++sLq TRIDC7BG048500.4 62 SHSLAERARREKINARMELLKELVPGC----SKVSGTALVLEEIINHVQSLQ 109 8*************************9....344668999999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
THHTLFSPER GLIVFALDCL PQGKVAKKGK TTAGGGEEKD SGEDEKPAYV HVRARRGQAT 60 DSHSLAERAR REKINARMEL LKELVPGCSK VSGTALVLEE IINHVQSLQR QVEYLSMRLA 120 AVNPRVDFGG LDNLLTTECG RITGLNCKSG MDLEQVSWPD MGVHGARNLA QLQQQFWHGD 180 LAHPHQPASQ WEKRGDVQPP GFSNTSSSLF GYDLASSGPQ QPPTSKLKTE L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57800.2	1e-51	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG048500.4