PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG046030.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 415aa    MW: 44070.9 Da    PI: 7.0026
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG046030.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS316.46.2e-97394152374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++l+l+cA+ ++ gdl++a+++ + l    sp+gd++ Rla +f++AL  r+ +   +    ++p++ +  +      a+ +f+++ P+l+f+
  TRIDC7BG046030.3  39 RDLVLACADLLQRGDLAAARRAAEILLSAGSPRGDATDRLAYHFARALVLRVDS---KAGLPFSPRPPA-GTAPAPSGAYLAFNQIAPFLRFA 127
                       6789*************************************************9...333334444444.336677789999*********** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl... 181
                       hltaNqaIleaveg++rvHi+D+d+ +G+QWp+Llqa+a+R+    gpp++RiTg g+    ++++l +tg+rL+ fA+++++pf+f +l   
  TRIDC7BG046030.3 128 HLTANQAILEAVEGSRRVHILDLDAAHGVQWPPLLQAIAERAdpaLGPPEVRITGAGA----DRDTLLRTGNRLRAFARSIHLPFHFAPLlls 216
                       ******************************************66666***********....9***************************888 PP

              GRAS 182 .........vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerfleal 261
                                 ++++ +  + +L+++p+E+laVn+vl lh+l       ++e  ++Lk vk + P vv+v+e+ea+ ++     ++ +r+  a+
  TRIDC7BG046030.3 217 caasthhvaGTSTTPSTAVTSLELHPDETLAVNCVLFLHKLG-----GQDELAAFLKWVKAMAPAVVTVAEREASGGGIdpidELPRRVGVAM 304
                       77766543222344445899*********************8.....2233577*******************99976556669********* PP

              GRAS 262 eyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrvee 353
                       ++ysa+f++lea++p+ s+er  vE+e+lgrei+ +v   g +     + le+W  + +  GF + pls +a++qa+lllr ++ s+gy v+e
  TRIDC7BG046030.3 305 DHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGGTGGR---WWRGLERWATAARGTGFAARPLSAFAVSQARLLLRLHYpSEGYLVQE 394
                       *************************************999887...7899******************************************* PP

              GRAS 354 esgslvlgWkdrpLvsvSaWr 374
                       ++g+ +lgW++rpL+svSaW+
  TRIDC7BG046030.3 395 SRGACFLGWQTRPLLSVSAWQ 415
                       ********************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    
EEDMIGSLHS SSSSDTDNNN NNNSNGGGGR ALAAAPSTRD LVLACADLLQ RGDLAAARRA  60
AEILLSAGSP RGDATDRLAY HFARALVLRV DSKAGLPFSP RPPAGTAPAP SGAYLAFNQI  120
APFLRFAHLT ANQAILEAVE GSRRVHILDL DAAHGVQWPP LLQAIAERAD PALGPPEVRI  180
TGAGADRDTL LRTGNRLRAF ARSIHLPFHF APLLLSCAAS THHVAGTSTT PSTAVTSLEL  240
HPDETLAVNC VLFLHKLGGQ DELAAFLKWV KAMAPAVVTV AEREASGGGI DPIDELPRRV  300
GVAMDHYSAV FEALEATVPP GSRERLAVEQ EVLGREIEAA VGGTGGRWWR GLERWATAAR  360
GTGFAARPLS AFAVSQARLL LRLHYPSEGY LVQESRGACF LGWQTRPLLS VSAWQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.14e-78GRAS family protein