PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG043820.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 302aa    MW: 33498.7 Da    PI: 9.4014
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG043820.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM111.11.3e-34542011128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkk........lelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra 77 
                       lp+G++F+Ptd+el+ e+L++kv++          +           +i+   +i++++P++Lp  v+++  + +fF++ +k+y+tg+rk+r+
  TRIDC7BG043820.3  54 LPAGVKFDPTDQELI-EHLEAKVQSGGtaavaapsH---PlidefipTIEGEdGICYTHPEKLP-GVSKDGLSRHFFHRPSKAYTTGTRKRRK 141
                       799************.99******999665555551...055555444776646**********.556667799******************8 PP

               NAM  78 ........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                                ++ +W++tgk+++v + +g++ g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  TRIDC7BG043820.3 142 iqppaiqqRSETRWHKTGKTRPVAV-GGRQRGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 201
                       5677766544889************.99************5547999999*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MDDGATATAG GGTSSGGHHL IGSRIEEHRK YMSDSSCCPR CGHKIDQKLD WVGLPAGVKF  60
DPTDQELIEH LEAKVQSGGT AAVAAPSHPL IDEFIPTIEG EDGICYTHPE KLPGVSKDGL  120
SRHFFHRPSK AYTTGTRKRR KIQPPAIQQR SETRWHKTGK TRPVAVGGRQ RGCKKILVLY  180
TNFGKHRKPE KTNWVMHQYH LGESEEEREG ELVVSKIFYQ TQPRQCGVGD GASASVPSST  240
GRSAVQKRRV DSAGTSPAVR MTPSDMVNAA FQGTTHIQDF SFAQFRNTVE EMKDKLFFWH  300
FL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-100NAC family protein