PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG041620.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 420aa MW: 46827.2 Da PI: 4.5597

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG041620.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.9e-09	352	399	6	53
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 +++k qle+Le+++ k++ p+ +++ + + ++L+ + + WF rR TRIDC7BG041620.1 352 RLKKAQLETLEKVYLKSKRPTNTMISSIVQVTSLPRKTIIKWFEDRRE 399 6789******************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
ANTLLDVPPR AALSFFHLIL FFRISFSHLL LFRVEPHSAT MAPRAETLSG PRKNTLVQLS 60 LLIINRACLD SDNKPTERVR IRQNIRNELV EMATTVVPLA AAMAAAPRSR LLTAPDPSPF 120 LGIRPLLCRS ARSVACALRR PSKYKNKIKD EVVVAEDDID GGDEDDDDEG GLEALFKQLE 180 EDLKNDDLSV DDDDDEISEE DMARFEQVLA EAMGDTDVAD ESAVDSAPGS EVVGNDEVAD 240 PVEKPELKSW QLRRLARALN IGRRKTSIKN LAGELGLDRG LVIELLRNPP PELLLMSDSL 300 PDEAPSKPET KEIETSPVAD EVEVDEIEAT ETKPQMDLPV HVMSTEWSAQ KRLKKAQLET 360 LEKVYLKSKR PTNTMISSIV QVTSLPRKTI IKWFEDRREQ DGVPDRRAAY MRSLSETMAS

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

ANTLLDVPPR AALSFFHLIL FFRISFSHLL LFRVEPHSAT MAPRAETLSG PRKNTLVQLS  60
LLIINRACLD SDNKPTERVR IRQNIRNELV EMATTVVPLA AAMAAAPRSR LLTAPDPSPF  120
LGIRPLLCRS ARSVACALRR PSKYKNKIKD EVVVAEDDID GGDEDDDDEG GLEALFKQLE  180
EDLKNDDLSV DDDDDEISEE DMARFEQVLA EAMGDTDVAD ESAVDSAPGS EVVGNDEVAD  240
PVEKPELKSW QLRRLARALN IGRRKTSIKN LAGELGLDRG LVIELLRNPP PELLLMSDSL  300
PDEAPSKPET KEIETSPVAD EVEVDEIEAT ETKPQMDLPV HVMSTEWSAQ KRLKKAQLET  360
LEKVYLKSKR PTNTMISSIV QVTSLPRKTI IKWFEDRREQ DGVPDRRAAY MRSLSETMAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11270.1	8e-50	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG041620.1