PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG040550.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 372aa MW: 39995.2 Da PI: 8.9407

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG040550.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.4	6.9e-54	28	159	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrFhPtdeel+++yL +kv + ++ +++i+e+d++k+ePw+Lp k + ++ ekewyf+s rd+ky+tg r+nrat +gyWkatgkd+e TRIDC7BG040550.1 28 LPPGFRFHPTDEELITYYLLRKVVDCGFSGARAIAEIDLNKCEPWELPdKaCKTTAEKEWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDRE 120 79*************************9999**********96534445788******************************* PP NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 + s+ +g+lvg+kktLvfy+grapkg+kt+Wvmhe+rle TRIDC7BG040550.1 121 IRSArNGALVGMKKTLVFYRGRAPKGQKTQWVMHEFRLE 159 9878899***************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
GRRARLLACG MERYGSLGMR LDGGGGELPP GFRFHPTDEE LITYYLLRKV VDCGFSGARA 60 IAEIDLNKCE PWELPDKACK TTAEKEWYFY SLRDRKYPTG LRTNRATGAG YWKATGKDRE 120 IRSARNGALV GMKKTLVFYR GRAPKGQKTQ WVMHEFRLEG VYAYHFLPNN TTRDEWVIAK 180 IFVKPGAVPP SRKARYGLSS AGDTSCFSDS TSVSIGGGGG ASASSAPRQQ LPDTSSLLAA 240 AHAAADGESS SYGATANNNA AGNCRELVPC FSTAHMDATL LGIGQYEPVT LAVEQPLAFF 300 QGSRLVQAAD NLSLPMFLPG GLQSGVSPLG MGGGTFQHWP PSGYDIKLEG SRAPPQMAVG 360 PGQLDGAYGW GF

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

GRRARLLACG MERYGSLGMR LDGGGGELPP GFRFHPTDEE LITYYLLRKV VDCGFSGARA  60
IAEIDLNKCE PWELPDKACK TTAEKEWYFY SLRDRKYPTG LRTNRATGAG YWKATGKDRE  120
IRSARNGALV GMKKTLVFYR GRAPKGQKTQ WVMHEFRLEG VYAYHFLPNN TTRDEWVIAK  180
IFVKPGAVPP SRKARYGLSS AGDTSCFSDS TSVSIGGGGG ASASSAPRQQ LPDTSSLLAA  240
AHAAADGESS SYGATANNNA AGNCRELVPC FSTAHMDATL LGIGQYEPVT LAVEQPLAFF  300
QGSRLVQAAD NLSLPMFLPG GLQSGVSPLG MGGGTFQHWP PSGYDIKLEG SRAPPQMAVG  360
PGQLDGAYGW GF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	1e-79	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG040550.1