PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7BG039930.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 539aa MW: 59050.7 Da PI: 7.7698

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG039930.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.7	1.2e-15	218	297	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ evGF +r ks+++ +g+ +++ vC + gk+e+e+++ + r +C a+l++++++dg w+v++ + HnHe+ TRIDC7BG039930.6 218 EFYNLYSWEVGFGIRYGKSRQN-VSGTKCMQEIVCGCAGKPERENSS---------SMRSNCAAMLRLHRTDDGGWYVSENRASHNHEML 297 6***************9998.77778999*****9987666.........99***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
PNLGQTAEAG LDSGTISAAT VPQACEPPFV VGECGDATPD SAVVTPDPAV EAPLPYIQLL 60 DQVVGLVDVQ SSGASCKSFS AGGGDLASAN PGCGTPAGVS HTSAESSRRS ASSGSCTTFS 120 SGGVCLPSAR DANDTPAVVS SSAVQSLAQN GAASGNSTIR VGWKRRPRGP RAPDERSVVV 180 DRVPPLEAAI RGFADRGTEV VVNPVLGTIF DSLAEAYEFY NLYSWEVGFG IRYGKSRQNV 240 SGTKCMQEIV CGCAGKPERE NSSSMRSNCA AMLRLHRTDD GGWYVSENRA SHNHEMLRTC 300 AEKLHWPSHR HIDTYTRDLV KQLRQNNVNL GKVYSIIGSL FGRMENVPFT KRCLRTFCGK 360 LSKEQADDDV RKTMDAFSEL GSNDPEFSYV VEVDKESKIK TLLWTNGRSK MQYHNFGDVL 420 TFDTTYKTNL YDMPFGIFVG VNNHFQSIIM GGVMMREETI ESFKWVFTEF IRLMGGKHPK 480 TILTDQARAM EVAIEQTMPD TTHRWCKWHV LRKAKEHLGP HYTKAVILGL RCTRWSMKC

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

PNLGQTAEAG LDSGTISAAT VPQACEPPFV VGECGDATPD SAVVTPDPAV EAPLPYIQLL  60
DQVVGLVDVQ SSGASCKSFS AGGGDLASAN PGCGTPAGVS HTSAESSRRS ASSGSCTTFS  120
SGGVCLPSAR DANDTPAVVS SSAVQSLAQN GAASGNSTIR VGWKRRPRGP RAPDERSVVV  180
DRVPPLEAAI RGFADRGTEV VVNPVLGTIF DSLAEAYEFY NLYSWEVGFG IRYGKSRQNV  240
SGTKCMQEIV CGCAGKPERE NSSSMRSNCA AMLRLHRTDD GGWYVSENRA SHNHEMLRTC  300
AEKLHWPSHR HIDTYTRDLV KQLRQNNVNL GKVYSIIGSL FGRMENVPFT KRCLRTFCGK  360
LSKEQADDDV RKTMDAFSEL GSNDPEFSYV VEVDKESKIK TLLWTNGRSK MQYHNFGDVL  420
TFDTTYKTNL YDMPFGIFVG VNNHFQSIIM GGVMMREETI ESFKWVFTEF IRLMGGKHPK  480
TILTDQARAM EVAIEQTMPD TTHRWCKWHV LRKAKEHLGP HYTKAVILGL RCTRWSMKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-43	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG039930.6