PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG039930.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 550aa MW: 60431.5 Da PI: 8.0008

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG039930.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.7	1.2e-15	229	308	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ evGF +r ks+++ +g+ +++ vC + gk+e+e+++ + r +C a+l++++++dg w+v++ + HnHe+ TRIDC7BG039930.5 229 EFYNLYSWEVGFGIRYGKSRQN-VSGTKCMQEIVCGCAGKPERENSS---------SMRSNCAAMLRLHRTDDGGWYVSENRASHNHEML 308 6***************9998.77778999*****9987666.........99***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
RCFLFRLSLL MPNLGQTAEA GLDSGTISAA TVPQACEPPF VVGECGDATP DSAVVTPDPA 60 VEAPLPYIQL LDQVVGLVDV QSSGASCKSF SAGGGDLASA NPGCGTPAGV SHTSAESSRR 120 SASSGSCTTF SSGGVCLPSA RDANDTPAVV SSSAVQSLAQ NGAASGNSTI RVGWKRRPRG 180 PRAPDERSVV VDRVPPLEAA IRGFADRGTE VVVNPVLGTI FDSLAEAYEF YNLYSWEVGF 240 GIRYGKSRQN VSGTKCMQEI VCGCAGKPER ENSSSMRSNC AAMLRLHRTD DGGWYVSENR 300 ASHNHEMLRT CAEKLHWPSH RHIDTYTRDL VKQLRQNNVN LGKVYSIIGS LFGRMENVPF 360 TKRCLRTFCG KLSKEQADDD VRKTMDAFSE LGSNDPEFSY VVEVDKESKI KTLLWTNGRS 420 KMQYHNFGDV LTFDTTYKTN LYDMPFGIFV GVNNHFQSII MGGVMMREET IESFKWVFTE 480 FIRLMGGKHP KTILTDQARA MEVAIEQTMP DTTHRWCKWH VLRKAKEHLG PHYTKAVILG 540 LRCTRWSMKC

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

RCFLFRLSLL MPNLGQTAEA GLDSGTISAA TVPQACEPPF VVGECGDATP DSAVVTPDPA  60
VEAPLPYIQL LDQVVGLVDV QSSGASCKSF SAGGGDLASA NPGCGTPAGV SHTSAESSRR  120
SASSGSCTTF SSGGVCLPSA RDANDTPAVV SSSAVQSLAQ NGAASGNSTI RVGWKRRPRG  180
PRAPDERSVV VDRVPPLEAA IRGFADRGTE VVVNPVLGTI FDSLAEAYEF YNLYSWEVGF  240
GIRYGKSRQN VSGTKCMQEI VCGCAGKPER ENSSSMRSNC AAMLRLHRTD DGGWYVSENR  300
ASHNHEMLRT CAEKLHWPSH RHIDTYTRDL VKQLRQNNVN LGKVYSIIGS LFGRMENVPF  360
TKRCLRTFCG KLSKEQADDD VRKTMDAFSE LGSNDPEFSY VVEVDKESKI KTLLWTNGRS  420
KMQYHNFGDV LTFDTTYKTN LYDMPFGIFV GVNNHFQSII MGGVMMREET IESFKWVFTE  480
FIRLMGGKHP KTILTDQARA MEVAIEQTMP DTTHRWCKWH VLRKAKEHLG PHYTKAVILG  540
LRCTRWSMKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-43	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG039930.5