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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC7BG037600.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | NAC | ||||||||
| Protein Properties | Length: 312aa MW: 34328 Da PI: 6.5108 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 161.2 | 3.9e-50 | 9 | 149 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyatgkrknratksgyW 83
+ppGfrFhPt+eelv +yL++kv+++k++l ++i+evd+y++ePwdL++ + ++e+yfFs +d+ky++g+r+nrat++g+W
TRIDC7BG037600.1 9 VPPGFRFHPTEEELVGYYLARKVSSHKIDL-DIIQEVDLYRIEPWDLQErcgkygggggGQEDPTTEYYFFSYKDRKYPSGTRTNRATAAGFW 100
69****************************.99**************954676665543222234499************************* PP
NAM 84 katgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
katg+dk+vls+ +++g++ktLvfy+grap+g+ktdW++heyrl
TRIDC7BG037600.1 101 KATGRDKPVLSSssssPASVIGMRKTLVFYRGRAPNGRKTDWIIHEYRL 149
***********854444445***************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 312 aa Download sequence |
MEESSCNTVP PGFRFHPTEE ELVGYYLARK VSSHKIDLDI IQEVDLYRIE PWDLQERCGK 60 YGGGGGGQED PTTEYYFFSY KDRKYPSGTR TNRATAAGFW KATGRDKPVL SSSSSSPASV 120 IGMRKTLVFY RGRAPNGRKT DWIIHEYRLQ SNEHAPTQEE GWVVCRAFVK PVPNQQHRLS 180 YGGGGYPTMN GSYNSASNYY YYDNPNARLM VAGGGPPHDQ HVLAVESKQQ VQLFPSDLPP 240 PLQSPTFDGE GEGDISQISG GCSSADQQLA AAAGTIDWNL WSSLLPSTAP QLFHGQTMTP 300 PPAANSSSSK NT |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G71930.1 | 9e-83 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC7BG037600.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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