PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG035620.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 327aa    MW: 36338 Da    PI: 9.859
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG035620.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.81.7e-52732011128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                       +ppGfrFhPt+eel+++yL+kkv++++++l +vi++vd++k+ePwd+++  k+ +  +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk
  TRIDC7BG035620.6  73 VPPGFRFHPTEEELLNYYLRKKVASEEIDL-DVIRDVDLNKLEPWDIQErcKIGSgPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDK 164
                       69****************************.9***************963444443456********************************** PP

               NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++++   + +g++ktLvfykgrap+g+k+dW+mheyrl
  TRIDC7BG035620.6 165 AIYN-AVKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 201
                       ****.8899***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
PFLPQRRITH SLLASSPPQL QALAPIYLPL SAHLPAFNTR TQSTGPWKNH FTQAVVLSID  60
LAMSISVNGQ SCVPPGFRFH PTEEELLNYY LRKKVASEEI DLDVIRDVDL NKLEPWDIQE  120
RCKIGSGPQN DWYFFSHKDK KYPTGTRTNR ATAAGFWKAT GRDKAIYNAV KRIGMRKTLV  180
FYKGRAPHGQ KSDWIMHEYR LDDPSSTTDA APTATMPLSL DAAVRHAQVV SAATSSDAGQ  240
EDGWVVCRVF KKKHHHKDAG AGSGKRGGGG RDDGGKAARS SSPLYSSDDA LDQILHYMGR  300
SCKQEHELSS PRPRTAASRY LRPLETV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.13e-91NAC family protein