PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG035620.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 375aa MW: 40907.4 Da PI: 7.7401 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.4 | 2.3e-52 | 11 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 +ppGfrFhPt+eel+++yL+kkv++++++l +vi++vd++k+ePwd+++ k+ + +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk TRIDC7BG035620.5 11 VPPGFRFHPTEEELLNYYLRKKVASEEIDL-DVIRDVDLNKLEPWDIQErcKIGSgPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDK 102 69****************************.9***************963444443456********************************** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ + +g++ktLvfykgrap+g+k+dW+mheyrl TRIDC7BG035620.5 103 AIYN-AVKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 139 ****.8899***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence |
MSISVNGQSC VPPGFRFHPT EEELLNYYLR KKVASEEIDL DVIRDVDLNK LEPWDIQERC 60 KIGSGPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKAIYNAVKR IGMRKTLVFY 120 KGRAPHGQKS DWIMHEYRLD DPSSTTDAAP TATMRHAQVV SAATSSDAGQ EDGWVVCRVF 180 KKKHHHKDAG AGSGKRGGGG RDDGGKAARS SSPLYSSDDA LDQILHYMGR SCKQEHELSS 240 PRPRTAASRY LRPLETVLDG HGFMKLPALE SPSAAATART STTTPLAPSG DGNVERELAH 300 AEDLHQPHRD GGITDWAMMD RLVASHLNGQ HDASTDQLCF DGTAGHTGGN DALNDTAVNG 360 LAYYSAAATR LLGGA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 9e-95 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG035620.5 |