PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7BG030780.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 664aa MW: 73086.3 Da PI: 4.4488

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG030780.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	100.2	2.9e-31	20	106	43	128
NAM 43 ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 e + L +++e+ ew+fF+++d+ky++g+r+nrat++gyWkatgkd+ ++sk k++ +g+kktLvf++grapkge+t W+mheyr TRIDC7BG030780.2 20 EDKAL---IRSEDPEWFFFAPKDRKYPNGSRSNRATEAGYWKATGKDRVIKSKgekkKQHMIGMKKTLVFHRGRAPKGERTGWIMHEYRT 106 44455...456788************************************976555556*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 664 aa Download sequence
MSIPLDEDSI SSDAGIVVLE DKALIRSEDP EWFFFAPKDR KYPNGSRSNR ATEAGYWKAT 60 GKDRVIKSKG EKKKQHMIGM KKTLVFHRGR APKGERTGWI MHEYRTTEPE FESGEQGGYV 120 LYRLFQKQLE KTERFILEEM DRSGYSPTPS RSTPDNMEAN EEAITLINKE SPESGLHGCP 180 IELPGTIDTP GTPVTRWLAD RNGNSGIDEA NVLGMPSHGN VDESPKADMS VGSLAHLIDS 240 QTKNLGSHEF ATVSAPMLSH DDLDKLLLQL PHNSVEDFLN ETIADPDEHS STACNVQYDA 300 DTGFMQAQGE LLYDGPNWFG NFLSDDTNPQ QSGLYENAAL LPYGTNPDVL SMDSGDESLQ 360 DLFNSMDDSS GQNDVWSNGF GFNPMHQQLQ STVHPNYIFS QQGIAPRRLR LLDSLSDVNV 420 ESRESMTRDE HEDEESDIVT SKYMSESVES SADVDDSDST GVTIMTRRRA LTKSVPSNCD 480 DAQSTGITIM ARRPAPSSNM RSDEADAEAT GINIMSRHTA PSSSTDSSFT TEQGTAVRRL 540 RLQSNLDAGS CSSVDGSSSC IIEHGSENEG LEAEIEEHVD TDFPDDAGNS HADEQMYMPD 600 HEANSGTRLR KTAEKSDKES KQECGLQSHV RAPRKRGGFA ARMILPVLSV ALLVLVSVGI 660 YGWA

Sequence ? help Back to Top

Protein Sequence Length: 664 aa Download sequence

MSIPLDEDSI SSDAGIVVLE DKALIRSEDP EWFFFAPKDR KYPNGSRSNR ATEAGYWKAT  60
GKDRVIKSKG EKKKQHMIGM KKTLVFHRGR APKGERTGWI MHEYRTTEPE FESGEQGGYV  120
LYRLFQKQLE KTERFILEEM DRSGYSPTPS RSTPDNMEAN EEAITLINKE SPESGLHGCP  180
IELPGTIDTP GTPVTRWLAD RNGNSGIDEA NVLGMPSHGN VDESPKADMS VGSLAHLIDS  240
QTKNLGSHEF ATVSAPMLSH DDLDKLLLQL PHNSVEDFLN ETIADPDEHS STACNVQYDA  300
DTGFMQAQGE LLYDGPNWFG NFLSDDTNPQ QSGLYENAAL LPYGTNPDVL SMDSGDESLQ  360
DLFNSMDDSS GQNDVWSNGF GFNPMHQQLQ STVHPNYIFS QQGIAPRRLR LLDSLSDVNV  420
ESRESMTRDE HEDEESDIVT SKYMSESVES SADVDDSDST GVTIMTRRRA LTKSVPSNCD  480
DAQSTGITIM ARRPAPSSNM RSDEADAEAT GINIMSRHTA PSSSTDSSFT TEQGTAVRRL  540
RLQSNLDAGS CSSVDGSSSC IIEHGSENEG LEAEIEEHVD TDFPDDAGNS HADEQMYMPD  600
HEANSGTRLR KTAEKSDKES KQECGLQSHV RAPRKRGGFA ARMILPVLSV ALLVLVSVGI  660
YGWA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.2	5e-44	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG030780.2