PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG028560.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 205aa MW: 22533.1 Da PI: 6.7651 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 52.9 | 1.2e-16 | 118 | 196 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fYn Y+ e+GF vr +ks+ + + + +++fvC + gk+ +++++ +tr+gC a ++v +++d+ w++ + + eHnH++ TRIDC7BG028560.4 118 EFYNLYSWETGFGVRYAKSRLNVHRK-KCMQEFVCACAGKPLQSNSR---------STRCGCPALMRVLRSDDKGWYICEHKAEHNHSV 196 6*****************99995555.78899********9997655.........9******************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MDDSSAKEQF RVVGANLGSQ NNGGSEVVGE SNDMASQETS HASMGDEGDA EGVVVNKAKA 60 SCWTRRVRIG NAPEERDANP SRVPALEASM RAYADNKVGT VVNPAIGTSF DTVEEAYEFY 120 NLYSWETGFG VRYAKSRLNV HRKKCMQEFV CACAGKPLQS NSRSTRCGCP ALMRVLRSDD 180 KGWYICEHKA EHNHSVSVNC MEKLH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18960.1 | 4e-15 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG028560.4 |