PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG026590.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 457aa MW: 49474.5 Da PI: 8.2565

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG026590.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.1	7.8e-35	115	206	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d++++ +iswse+g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ F++g+k+ll TRIDC7BG026590.2 115 FLNKTYQLVDDPAVDGVISWSEDGSAFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANDCFRRGEKRLL 198 9***************************************************************99.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r+k TRIDC7BG026590.2 199 CDIHRRKV 206 ***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
LTWRSRHEWR ARRPRVYSFP LRNCRCLPYS SVPSSRRVSV SNFLASLHAT LSGTFRRVAL 60 PPSLPFRPTA SSAQICAVGG SGAMGEQAAA VSSGETPAPA EVGTGLGQRS LPTPFLNKTY 120 QLVDDPAVDG VISWSEDGSA FIVWRPAEFA RDLLPKYFKH NNFSSFVRQL NTYGFRKIVP 180 DRWEFANDCF RRGEKRLLCD IHRRKVTPTV AATAAVTVAA AAAIPVALPV AKRQGSPVLS 240 GDEQVLSSSS SPEPPFLNQY APSYSGSGGV ASGDLGEENE RLRRENSRLT RELGQMKKLC 300 NNIFVLMSKY TDGQQPDAAN ATSAAADVGN CSGESAETTA LPPPPVLELL PSCPNAPTAA 360 DLGSEEEEEK MSARLFGVCI GRKRMRHDGE DPTSRGAAAE VKPEPMDAQQ PSGMDGHTPE 420 VQAWPIYRPR PVYHPLRASD GSNCYSGSDD HNGSNSR

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

LTWRSRHEWR ARRPRVYSFP LRNCRCLPYS SVPSSRRVSV SNFLASLHAT LSGTFRRVAL  60
PPSLPFRPTA SSAQICAVGG SGAMGEQAAA VSSGETPAPA EVGTGLGQRS LPTPFLNKTY  120
QLVDDPAVDG VISWSEDGSA FIVWRPAEFA RDLLPKYFKH NNFSSFVRQL NTYGFRKIVP  180
DRWEFANDCF RRGEKRLLCD IHRRKVTPTV AATAAVTVAA AAAIPVALPV AKRQGSPVLS  240
GDEQVLSSSS SPEPPFLNQY APSYSGSGGV ASGDLGEENE RLRRENSRLT RELGQMKKLC  300
NNIFVLMSKY TDGQQPDAAN ATSAAADVGN CSGESAETTA LPPPPVLELL PSCPNAPTAA  360
DLGSEEEEEK MSARLFGVCI GRKRMRHDGE DPTSRGAAAE VKPEPMDAQQ PSGMDGHTPE  420
VQAWPIYRPR PVYHPLRASD GSNCYSGSDD HNGSNSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	7e-57	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG026590.2