PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG025590.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 296aa    MW: 32276.9 Da    PI: 6.7173
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG025590.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH291.9e-09136183455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR+ri +++  L++l+P +    +k   Ka +L + ++Y++sLq
  TRIDC7BG025590.2 136 SHSLAERVRRERISERMRLLQTLVPGC----DKVTGKALVLDEIINYVQSLQ 183
                       8*************************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MADFSSVHHH SLLKMPAAFT TNDTSTPNIS SFLLYNQTSH GQSPAPANAC ATMVEDASRE  60
SSSAVLDNAS LQASASVDRK RKATDDSTTL SSAHSKDCKD GKSRRKREKS STEQDQEEAP  120
KGYIHVRARR GQATDSHSLA ERVRRERISE RMRLLQTLVP GCDKVTGKAL VLDEIINYVQ  180
SLQNQVEFLS MRIASMSPVL YGFGLDSDGL HDQAQKIGGM FQQEALAVPA PALNQASPAA  240
SQTMMDTTSY SLQGQGGISF SQSQSQDSGS YLMQSVGEQR QELLNQLVFS NMCSFQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104109RRKREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.25e-45bHLH family protein