PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG025440.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 83aa MW: 9718.26 Da PI: 11.5675 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 53.1 | 1.1e-16 | 19 | 71 | 1 | 53 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvka 53 lppGfrF+Ptdeelvv+yL++k+ + +l++ vi++v ++y+++Pwd+p + ++ TRIDC7BG025440.2 19 LPPGFRFRPTDEELVVQYLRRKALALPLPA-AVISDVhNLYSLDPWDIPGTPRT 71 79****************************.89999999*********953222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 83 aa Download sequence |
MERTPVMVRQ GGQEVLRQLP PGFRFRPTDE ELVVQYLRRK ALALPLPAAV ISDVHNLYSL 60 DPWDIPGTPR TQHKHGRRRR RHC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 70 | 81 | RTQHKHGRRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.3 | 4e-12 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG025440.2 |