PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG024190.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 212aa MW: 23604.1 Da PI: 11.3077 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.6 | 5.1e-09 | 92 | 139 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L++l+P + +k Ka +L + ++Y++sLq TRIDC7BG024190.7 92 SHSLAERVRRERISQRMKFLQDLVPGC----NKVIGKALMLDEIINYVQSLQ 139 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
PMPRRGRRPR PKARPRSLPS APLVGEQKEA DVKRCRTGDA EKKVKPKAEQ AGSDSSVEDG 60 EQRKGKGKNA KPVEPPKDYV HVRARRGQAT DSHSLAERVR RERISQRMKF LQDLVPGCNK 120 VIGKALMLDE IINYVQSLQR QVEFLSMKLA TVNPLDFSNL PTLLHKDVSP KCTAHRRARC 180 SRSRAPARPS RSATKETSSS PSCPAAWRAS AP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 4 | 45 | RRGRRPRPKARPRSLPSAPLVGEQKEADVKRCRTGDAEKKVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48560.1 | 2e-52 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG024190.7 |