PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7BG024190.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 310aa MW: 33066.4 Da PI: 10.3651

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG024190.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.8	9.5e-09	190	237	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L++l+P + +k Ka +L + ++Y++sLq TRIDC7BG024190.10 190 SHSLAERVRRERISQRMKFLQDLVPGC----NKVIGKALMLDEIINYVQSLQ 237 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MEGRAGGGSG DYITSLLTSS PMFDFGVLDG AVAAGGNCLE KFCGDPGFAE RAARLSSFNG 60 QHFTPGLFGM PPPAPGAGNG EFGGSREASS VSDPASAMKD ANAKKRKAPA AKGKAKEPSL 120 SVGEQKEADV KRCRTGDAEK KVKPKAEQAG SDSSVEDGEQ RKGKGKNAKP VEPPKDYVHV 180 RARRGQATDS HSLAERVRRE RISQRMKFLQ DLVPGCNKVI GKALMLDEII NYVQSLQRQV 240 EFLSMKLATV NPLDFSNLPT LLHKDVSPKC TAHRRARCSR SRAPARPSRS ATKETSSSPS 300 CPAAWRASAP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	104	143	KKRKAPAAKGKAKEPSLSVGEQKEADVKRCRTGDAEKKVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	6e-53	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG024190.10