PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7BG022390.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 1107aa MW: 120915 Da PI: 7.2534

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG022390.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130	8.9e-41	192	269	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C+adl++ak+yhrrhkvCe+hsk+++++v +++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+q+ TRIDC7BG022390.5 192 MCQVDDCRADLTSAKDYHRRHKVCEIHSKTTKAVVGNQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 269 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1107 aa Download sequence
MQREVGPQVA SPLYLHQIQP LPPHAAAAAR KRGSPWPAVE PPENAAMGAG AAAGGNWNPS 60 MWDWDSRAFT ARPSSDALRL GGGLNHHHHH HHQQQAQPPP ATAAEVQRQG GGGAGDLSLQ 120 LTLREEASMA MDVSPTTTLS SSPSPPARAS QEQAVRPSKR VRSGSPGTAS GGGGGGGGGG 180 GGSASGGGSY PMCQVDDCRA DLTSAKDYHR RHKVCEIHSK TTKAVVGNQM QRFCQQCSRF 240 HPLSEFDEGK RSCRRRLAGH NRRRRKTQPT DVASQLLLPE NQENAANRTQ DIVNLITVIA 300 RLQGGNVGKL PSIPPIPDKD NLVQIISKIN SINNANSLAK SPPSEAIDLN ASQGQQQDSS 360 VQNATKVIDK QTAPSTMDLL TVLSGALGTS TPETNTSQSQ GSSDSSGNNK SKSHSTEPAC 420 VVNSHEKSIR PFPAAGMIRS SSTHGSPPEV YKQPDRDTHP YLSLQLFGNN EDIPVKMDTA 480 NKYLSSESSN PMDERSPSSS PPVTHTFFPT RSVNEGIRHP RIADYGEDGA TVENSTTRAW 540 CAPPLELFKD SERPTENGSP PNPTYQSCYA STSGSDHSTS TSNSDGQDRT GKIIFKLFGK 600 EPGSIPGNLR DEVVNWLKHS PTEMEGYIRP GCLVLSMYLS MPTIAWDELE ENFLQRVNSL 660 VQASDLDFWR KGRTWNTPEL TLVTPIAVVG GRKTSLVLKG RNLTIPGTQI HCTSAGKYIS 720 KEVLCSAYPG TIYDDSGVET FDLPGEPSLT LGRCFIEVEN RFRGNSFPVI FANKSICQEL 780 RNLEDELEDS RFPDVSPDDQ VHDARRLKPR DQVLHFLNEL GWLFQKAAAC TPSTKSDVSD 840 SELIQFSTAR FRHLLLFSNE RDWCSLTKTL LEILSKRSMV SEELSHETLE MLSEIHLLNR 900 AVKRKSSHMV HLLVHFVVIC PDNSKLYPFL PNYPGPGGLT PLHLAASIDD AEDIVDALTD 960 DPQQIGLSCW HSVLDDEGLS PELYAKFRNN GSYNELVTRK LVDRKNSQVT IVLNKGEIHM 1020 DQPGNVGVNN ASGIQALEVR SCNQCAILES GLLRRPMRSR GLLARPYIHS MLAIAAVCVC 1080 VCVFMRALLR FNSGRSFKWE RLDFGPT

Sequence ? help Back to Top

Protein Sequence Length: 1107 aa Download sequence

MQREVGPQVA SPLYLHQIQP LPPHAAAAAR KRGSPWPAVE PPENAAMGAG AAAGGNWNPS  60
MWDWDSRAFT ARPSSDALRL GGGLNHHHHH HHQQQAQPPP ATAAEVQRQG GGGAGDLSLQ  120
LTLREEASMA MDVSPTTTLS SSPSPPARAS QEQAVRPSKR VRSGSPGTAS GGGGGGGGGG  180
GGSASGGGSY PMCQVDDCRA DLTSAKDYHR RHKVCEIHSK TTKAVVGNQM QRFCQQCSRF  240
HPLSEFDEGK RSCRRRLAGH NRRRRKTQPT DVASQLLLPE NQENAANRTQ DIVNLITVIA  300
RLQGGNVGKL PSIPPIPDKD NLVQIISKIN SINNANSLAK SPPSEAIDLN ASQGQQQDSS  360
VQNATKVIDK QTAPSTMDLL TVLSGALGTS TPETNTSQSQ GSSDSSGNNK SKSHSTEPAC  420
VVNSHEKSIR PFPAAGMIRS SSTHGSPPEV YKQPDRDTHP YLSLQLFGNN EDIPVKMDTA  480
NKYLSSESSN PMDERSPSSS PPVTHTFFPT RSVNEGIRHP RIADYGEDGA TVENSTTRAW  540
CAPPLELFKD SERPTENGSP PNPTYQSCYA STSGSDHSTS TSNSDGQDRT GKIIFKLFGK  600
EPGSIPGNLR DEVVNWLKHS PTEMEGYIRP GCLVLSMYLS MPTIAWDELE ENFLQRVNSL  660
VQASDLDFWR KGRTWNTPEL TLVTPIAVVG GRKTSLVLKG RNLTIPGTQI HCTSAGKYIS  720
KEVLCSAYPG TIYDDSGVET FDLPGEPSLT LGRCFIEVEN RFRGNSFPVI FANKSICQEL  780
RNLEDELEDS RFPDVSPDDQ VHDARRLKPR DQVLHFLNEL GWLFQKAAAC TPSTKSDVSD  840
SELIQFSTAR FRHLLLFSNE RDWCSLTKTL LEILSKRSMV SEELSHETLE MLSEIHLLNR  900
AVKRKSSHMV HLLVHFVVIC PDNSKLYPFL PNYPGPGGLT PLHLAASIDD AEDIVDALTD  960
DPQQIGLSCW HSVLDDEGLS PELYAKFRNN GSYNELVTRK LVDRKNSQVT IVLNKGEIHM  1020
DQPGNVGVNN ASGIQALEVR SCNQCAILES GLLRRPMRSR GLLARPYIHS MLAIAAVCVC  1080
VCVFMRALLR FNSGRSFKWE RLDFGPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG022390.5