PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7BG022390.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 629aa MW: 67964.5 Da PI: 8.5355

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG022390.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131	4.2e-41	88	165	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C+adl++ak+yhrrhkvCe+hsk+++++v +++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+q+ TRIDC7BG022390.3 88 MCQVDDCRADLTSAKDYHRRHKVCEIHSKTTKAVVGNQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 165 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
EVQRQGGGGA GDLSLQLTLR EEASMAMDVS PTTTLSSSPS PPARASQEQA VRPSKRVRSG 60 SPGTASGGGG GGGGGGGGSA SGGGSYPMCQ VDDCRADLTS AKDYHRRHKV CEIHSKTTKA 120 VVGNQMQRFC QQCSRFHPLS EFDEGKRSCR RRLAGHNRRR RKTQPTDVAS QLLLPENQEN 180 AANRTQDIVN LITVIARLQG GNVGKLPSIP PIPDKDNLVQ IISKINSINN ANSLAKSPPS 240 EAIDLNASQG QQQDSSVQNA TKVIDKQTAP STMDLLTVLS GALGTSTPET NTSQSQGSSD 300 SSGNNKSKSH STEPACVVNS HEKSIRPFPA AGMIRSSSTH GSPPEVYKQP DRDTHPYLSL 360 QLFGNNEDIP VKMDTANKYL SSESSNPMDE RSPSSSPPVT HTFFPTRSVN EGIRHPRIAD 420 YGEDGATVEN STTRAWCAPP LELFKDSERP TENGSPPNPT YQSCYASTSG SDHSTSTSNS 480 DGQDRTGKII FKLFGKEPGS IPGNLRDEVV NWLKHSPTEM EGYIRPGCLV LSMYLSMPTI 540 AWDELEENFL QRVNSLVQAS DLDFWRKGRF LVRSDNQLVS YKDGMTRLSK SWRTWNTPEL 600 TLVTPIAVVG GRKTSLVLKG RNLTIPGTQ

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

EVQRQGGGGA GDLSLQLTLR EEASMAMDVS PTTTLSSSPS PPARASQEQA VRPSKRVRSG  60
SPGTASGGGG GGGGGGGGSA SGGGSYPMCQ VDDCRADLTS AKDYHRRHKV CEIHSKTTKA  120
VVGNQMQRFC QQCSRFHPLS EFDEGKRSCR RRLAGHNRRR RKTQPTDVAS QLLLPENQEN  180
AANRTQDIVN LITVIARLQG GNVGKLPSIP PIPDKDNLVQ IISKINSINN ANSLAKSPPS  240
EAIDLNASQG QQQDSSVQNA TKVIDKQTAP STMDLLTVLS GALGTSTPET NTSQSQGSSD  300
SSGNNKSKSH STEPACVVNS HEKSIRPFPA AGMIRSSSTH GSPPEVYKQP DRDTHPYLSL  360
QLFGNNEDIP VKMDTANKYL SSESSNPMDE RSPSSSPPVT HTFFPTRSVN EGIRHPRIAD  420
YGEDGATVEN STTRAWCAPP LELFKDSERP TENGSPPNPT YQSCYASTSG SDHSTSTSNS  480
DGQDRTGKII FKLFGKEPGS IPGNLRDEVV NWLKHSPTEM EGYIRPGCLV LSMYLSMPTI  540
AWDELEENFL QRVNSLVQAS DLDFWRKGRF LVRSDNQLVS YKDGMTRLSK SWRTWNTPEL  600
TLVTPIAVVG GRKTSLVLKG RNLTIPGTQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76580.1	1e-126	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG022390.3