PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC7BG022040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 166aa MW: 18377.8 Da PI: 11.7161 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.2 | 3.8e-13 | 14 | 59 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+WT+eEde l + v+++G++ W++I ++ + Rt+k+c++rw + TRIDC7BG022040.1 14 KGPWTAEEDEVLHQHVREHGPREWSSIRSKGLLPRTGKSCRLRWVN 59 79*************************8876677**********87 PP | |||||||
2 | Myb_DNA-binding | 44.6 | 3.3e-14 | 70 | 110 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++ eE+ +d+ +q+G++ W++Ia +++ gRt++++k++w TRIDC7BG022040.1 70 KFSSEEERVVIDLQAQFGNK-WARIATYLP-GRTDNDVKNFWS 110 79******************.*********.***********5 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 166 aa Download sequence |
MQPRGGGDRV AVRKGPWTAE EDEVLHQHVR EHGPREWSSI RSKGLLPRTG KSCRLRWVNK 60 LRPDLKTGCK FSSEEERVVI DLQAQFGNKW ARIATYLPGR TDNDVKNFWS TRQKRLARIL 120 RAPLPRRRSA SAAAKHSGGV GGVGAASSSA ASNSHEAAAA RRSPCF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G60460.1 | 2e-64 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC7BG022040.1 |