PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG020680.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 363aa MW: 40151.1 Da PI: 9.0614

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG020680.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24.9	3.4e-08	18	80	6	56
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRakek 56 +ft+ ++ e+ee+ + n p+++ ++ LA+k ++ +qV +WFqNrR+ ++ TRIDC7BG020680.1 18 RFTHAEVAEMEEHLRHlnNAIPQRNVIQGLAEKFtasaaragkiPVQYKQVWNWFQNRRYSQR 80 69999*****999554999*****************99999***********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
RRRRRMGRPP SSGGPAFRFT HAEVAEMEEH LRHLNNAIPQ RNVIQGLAEK FTASAARAGK 60 IPVQYKQVWN WFQNRRYSQR ARTPRGAPPP QGKMLPTGAD EHHPASFRAQ GSSSSYPGSH 120 SGKSASDGGQ AEFEAKSARD GAWYDVAAFL SHRLFETGDP EVKVRFSGFG PEEDEWINVR 180 KCVRLRSLPC EAAECVAVLP GDLILCFQEG KEQALYFDAR VLDAQRRRHD VRGCRCRFLV 240 RYDHDHSEIV PLRKVCRRPE TDFRLQILHA SRAAASADAQ NVSPVEQKPQ KAHKMMDVNT 300 AEVTVVRNPD QGGPSDKPAA PLPAAPAGTH GDSVSDVQMG SVEVIPKVEA ANEAHDDKMN 360 VGA

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

RRRRRMGRPP SSGGPAFRFT HAEVAEMEEH LRHLNNAIPQ RNVIQGLAEK FTASAARAGK  60
IPVQYKQVWN WFQNRRYSQR ARTPRGAPPP QGKMLPTGAD EHHPASFRAQ GSSSSYPGSH  120
SGKSASDGGQ AEFEAKSARD GAWYDVAAFL SHRLFETGDP EVKVRFSGFG PEEDEWINVR  180
KCVRLRSLPC EAAECVAVLP GDLILCFQEG KEQALYFDAR VLDAQRRRHD VRGCRCRFLV  240
RYDHDHSEIV PLRKVCRRPE TDFRLQILHA SRAAASADAQ NVSPVEQKPQ KAHKMMDVNT  300
AEVTVVRNPD QGGPSDKPAA PLPAAPAGTH GDSVSDVQMG SVEVIPKVEA ANEAHDDKMN  360
VGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.3	1e-92	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG020680.1