PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG018990.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 441aa    MW: 51079.1 Da    PI: 7.966
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG018990.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.77.2e-10135175346
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       +WT eE e++ + v++ G++ Wkt a+++g  +++ ++k+ w+ 
  TRIDC7BG018990.7 135 KWTHEEKEQIQQFVEKNGTD-WKTLAQELG--KSEIHVKHAWRR 175
                       8*******************.********8..9*******9986 PP
2Myb_DNA-binding29.71.5e-09275316347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT +E e++ + v+  G++ Wkt ar++g  +++ ++k+ w+  
  TRIDC7BG018990.7 275 KWTDDEKEKIRRFVEINGTD-WKTLARELG--KSEIHVKDTWRRM 316
                       8*******************.********8..9*******99975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MFRTEGGDGD GIGGRKKKEK AAPSKKKGKR VSFADSAEVF SIEGGNNEED VSSDESKRVH  60
GRFTPEEDAT LMEAMRGYAE MKQLGEKGLE MIGSCCKYPE LKGCWDDIAK SLPHRPYLAI  120
YRRAHTLLYR STGCKWTHEE KEQIQQFVEK NGTDWKTLAQ ELGKSEIHVK HAWRRIKPKK  180
KKGADDEEDV SGSESELVHG HRFTAEEDAI LMEAMRDYAE LKQLGEKGLE MIGSCSKYPE  240
LKGCWDDIAK SLPHRPHEAI YHRARILLYR GAERKWTDDE KEKIRRFVEI NGTDWKTLAR  300
ELGKSEIHVK DTWRRMKPKN LKKGRWTQDE HQNLFDLVNL DLRLKAHQIK NPDHRMLRDN  360
ISWEAISDKL TTRNHKNCCL KWYETLASPM VKEGIWSDVD DYLLVEALQK VDAVCIEDVD  420
WDSLLDHRKR KGFALHCISM V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11520RKKKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.11e-79MYB_related family protein