PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7BG018990.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 381aa MW: 42686.3 Da PI: 10.1684

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG018990.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.9	1.3e-09	283	324	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E e++ + v+ G++ Wkt ar++g +++ ++k+ w+ TRIDC7BG018990.5 283 KWTDDEKEKIRRFVEINGTD-WKTLARELG--KSEIHVKDTWRRM 324 8*****************.****8..9*****99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
TFDTTVENSG AEPTERDTVD GKQSSKSKKS KRKHNDGAPA VEVSAGDQIV TREDKKRRKE 60 PVVLEASNQT QNTNEGENRE IKKRGKESSK ASPDFSENAS AGGVEAGLGV NNDKKKKKSK 120 GIGGGKKKKE KAARSTKGKR VSSADSVEMF RTEGGDGDGI GGRKKKEKAA PSKKKGKRVS 180 FADSAEVFSI EGGNNEEDVS SDESKRVHGR FTPEEDATLM EAMRGYAEMK QLGEKGLEMI 240 GSCCKYPELK GCWDDIAKSL PHRPHEAIYH RARILLYRGA ERKWTDDEKE KIRRFVEING 300 TDWKTLAREL GKSEIHVKDT WRRMKPKNLK KGRWTQDEHQ NLFDLVNLDL RLKAHQIKNP 360 DHRMVCNLPM LLILCILVQL S

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

TFDTTVENSG AEPTERDTVD GKQSSKSKKS KRKHNDGAPA VEVSAGDQIV TREDKKRRKE  60
PVVLEASNQT QNTNEGENRE IKKRGKESSK ASPDFSENAS AGGVEAGLGV NNDKKKKKSK  120
GIGGGKKKKE KAARSTKGKR VSSADSVEMF RTEGGDGDGI GGRKKKEKAA PSKKKGKRVS  180
FADSAEVFSI EGGNNEEDVS SDESKRVHGR FTPEEDATLM EAMRGYAEMK QLGEKGLEMI  240
GSCCKYPELK GCWDDIAKSL PHRPHEAIYH RARILLYRGA ERKWTDDEKE KIRRFVEING  300
TDWKTLAREL GKSEIHVKDT WRRMKPKNLK KGRWTQDEHQ NLFDLVNLDL RLKAHQIKNP  360
DHRMVCNLPM LLILCILVQL S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	55	59	KKRRK
2	114	129	KKKKKSKGIGGGKKKK
3	115	130	KKKKKSKGIGGGKKKK
4	126	168	KKKKEKAARSTKGKRVSSADSVEMFRTEGGDGDGIGGRKKKEK
5	163	168	RKKKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	1e-46	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG018990.5