PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG018420.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

DBB

Protein Properties

Length: 245aa MW: 26523.8 Da PI: 5.9183

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG018420.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.3	2.4e-06	4	45	5	40
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 C+ ++e++ +C+++ lC +C + H+ Ht++ TRIDC7BG018420.6 4 LCDYCGEHRSMVYCRSDAASLCLSCDRNVHSAnalsrrHTRT 45 6****99*******************657888889876 PP
2	zf-B_box	26.8	1.1e-08	47	89	5	41
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+++ ++++ C + ++ lC++C ++H+ H++++ TRIDC7BG018420.6 47 LCDRCASQPAMVRCLEENTSLCQNCDWNGHSAgssaagHKRQN 89 7*****************************6688899998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MGALCDYCGE HRSMVYCRSD AASLCLSCDR NVHSANALSR RHTRTLLCDR CASQPAMVRC 60 LEENTSLCQN CDWNGHSAGS SAAGHKRQNI NCYSGCPSSA ELSRMWSFIL DIPNVAPELN 120 CEQVISMMSI SDSAVSNGDN AQGDNSLVDM ACATLDEEDK QKSVIGSSSE AALNLLPPAN 180 NQTAVSVDST TAKIISLGLS TSSTQSATWP KISHVWAFFS GKDRRWFQNI VEAVVVYCSP 240 RILLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	5e-60	CO-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG018420.6