PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG017260.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 440aa MW: 47515.9 Da PI: 5.9063

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG017260.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.2	7.1e-09	274	322	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq TRIDC7BG017260.3 274 NSHSLAERVRREKISERMKFLQDLVPGC----SKVIGKAVMLDEIINYVQSLQ 322 58***********************9....566***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
METNEKNAAD LEEKNQPSGH SQQPSFHGPG FSLSPEAQMD SSSSALAAMG NPFPPGLWNP 60 PGQNFGLGET NTNAMLNGHQ FSSFLGMLSA ATPAYPGAQS GFMDCGTGFP GLSANSLGAM 120 MDHPFSRNPP MGSFQNDIET SREMNVDEGC KDALLTGDRQ QGDTESSHGV DASSKELSKP 180 ECSGGAGQDE GPSVSCPKKR KRPSQDRGVK NVQEGSQQLA TLAAKQEKDD DDKDEPKRPI 240 GTSRKSNGKQ TEDKSDAPKE DYIHIRARSG QATNSHSLAE RVRREKISER MKFLQDLVPG 300 CSKVIGKAVM LDEIINYVQS LQRQVEFLSM KLSAVNPALX XXXXXXXXXX LFQSQGTASS 360 TFGFLPDIGH QFLHPPKHSQ AALHSIVNPA DAFGRVTNAP VGCTFKEATH QVPNSFDGEF 420 HNVIGMPFTL FNDQESNGKP

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

METNEKNAAD LEEKNQPSGH SQQPSFHGPG FSLSPEAQMD SSSSALAAMG NPFPPGLWNP  60
PGQNFGLGET NTNAMLNGHQ FSSFLGMLSA ATPAYPGAQS GFMDCGTGFP GLSANSLGAM  120
MDHPFSRNPP MGSFQNDIET SREMNVDEGC KDALLTGDRQ QGDTESSHGV DASSKELSKP  180
ECSGGAGQDE GPSVSCPKKR KRPSQDRGVK NVQEGSQQLA TLAAKQEKDD DDKDEPKRPI  240
GTSRKSNGKQ TEDKSDAPKE DYIHIRARSG QATNSHSLAE RVRREKISER MKFLQDLVPG  300
CSKVIGKAVM LDEIINYVQS LQRQVEFLSM KLSAVNPALX XXXXXXXXXX LFQSQGTASS  360
TFGFLPDIGH QFLHPPKHSQ AALHSIVNPA DAFGRVTNAP VGCTFKEATH QVPNSFDGEF  420
HNVIGMPFTL FNDQESNGKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	197	203	PKKRKRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	3e-55	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG017260.3