PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG012000.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 196aa MW: 21665.2 Da PI: 4.4125 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 31.5 | 2.3e-10 | 1 | 27 | 25 | 51 |
HHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 25 eELSvLCdaevaviifsstgklyeyss 51 eEL vLCda+va+++fsstgkl ++s TRIDC7BG012000.5 1 EELAVLCDADVALVVFSSTGKLSQFAS 27 6**********************9986 PP | |||||||
2 | K-box | 49.2 | 2.3e-17 | 61 | 140 | 20 | 99 |
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++ L++++ + +R++ Ge+L+ Ls+ eLqq+e++Le++l+++ +K++ +++qi++lq+k +l een++L++++ TRIDC7BG012000.5 61 KYDSLNEQLAEASLRLRRMRGEELDGLSVGELQQMEKNLETGLQRVLCTKDRQFMQQINDLQQKGTQLAEENMRLKNQMH 140 5677777777777899************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
EELAVLCDAD VALVVFSSTG KLSQFASSSM NEIIDKYSTH SKNLGKSNQQ PAIDLNLEHC 60 KYDSLNEQLA EASLRLRRMR GEELDGLSVG ELQQMEKNLE TGLQRVLCTK DRQFMQQIND 120 LQQKGTQLAE ENMRLKNQMH EVPTASMVAV ADADAENVVP DDVHSSDSVM TAVHSASSQD 180 NDDGSDISLK LALPWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 3e-34 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG012000.5 |