PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG011540.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 672aa    MW: 74639.1 Da    PI: 4.778
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG011540.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS359.45.4e-1102916661373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av++gd + a++lL ++++++ p+gd++qRla++f+e+L+arla+++s++y++l +++ts   ++e l+a+klf  ++ + k 
  TRIDC7BG011540.1 291 LRTMLVHCAQAVAAGDSRGATELLRQIKQHSGPTGDATQRLAHCFAEGLEARLAGTGSQVYQSLVAKRTS---VVEFLKAYKLFMAACCFKKA 380
                       5789***************************************************************999...******************** PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                        +  aN++Il+av+g++r+Hi+Df++++GlQWp L++ La+R++gpp++RiTg++ p++g   ++++eetg+rL++ A+elgvpf+f+  va 
  TRIDC7BG011540.1 381 NFGFANKTILNAVAGKRRLHIVDFGVQYGLQWPGLMRWLAQRDGGPPEVRITGIDLPQPGfrPARQVEETGRRLSSCARELGVPFKFHG-VAA 472
                       ***********************************************************9*9***************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsles.....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                       +l++++ e+Lr++p+E+l+V+++  l +l+d+sv+++      +rd vL+ +++++P+v+v    +  ++++ F++rf ea+ +ysa fd+l+
  TRIDC7BG011540.1 473 KLDTVRGEDLRIDPDEVLIVHCQCGLSNLMDDSVAVTTdggpsPRDVVLRNIRDMRPDVFVEGVANGGYGAPFFVTRFREAMFFYSAHFDMLD 565
                       **********************************9987778889************************************************* PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365
                       a+lpr+++er  +Er ++gr + nv+acega+r+er et+++W++r ++aG++++pl+ +++  ++  +r+++ + + v+ ++++l++gWk+r
  TRIDC7BG011540.1 566 ATLPRDNDERLLIERDIIGRGALNVIACEGADRVERPETYRQWQARNRRAGLRQLPLDPEVVGMVREKVREHYHKDFLVDVDHQWLLQGWKGR 658
                       *************************************************************************888***************** PP

              GRAS 366 pLvsvSaW 373
                        L+++S W
  TRIDC7BG011540.1 659 VLYALSTW 666
                       ******** PP
Sequence ? help Back to Top
Protein Sequence    Length: 672 aa     Download sequence    
LSQRLPAMDA TPEEFEALSP SLFLDLPPTP PPAGDVDLDF ISRMLMEEDI DDKFFYQYPD  60
QPAILDAQRP YEQIISDTTT TSSGSPNGTT SSDGNAATSS SEETNNSSWP YDPLELSQLL  120
RSPPCLDDML FGGLVPDSPA DEDDGLLSAF FSNGGDMDML NSAFLKGMEE ANKFLPTNNA  180
LLEAIPDKER GFTVKKKEVV ANGTPTSGNG RGRKYRHDED DDLEAETARS SKLMTPDNEE  240
TGAREMFDEI MLEEYEKCIQ GIEELRLVMD SEAKKKSGKA ARAKKSEAVD LRTMLVHCAQ  300
AVAAGDSRGA TELLRQIKQH SGPTGDATQR LAHCFAEGLE ARLAGTGSQV YQSLVAKRTS  360
VVEFLKAYKL FMAACCFKKA NFGFANKTIL NAVAGKRRLH IVDFGVQYGL QWPGLMRWLA  420
QRDGGPPEVR ITGIDLPQPG FRPARQVEET GRRLSSCARE LGVPFKFHGV AAKLDTVRGE  480
DLRIDPDEVL IVHCQCGLSN LMDDSVAVTT DGGPSPRDVV LRNIRDMRPD VFVEGVANGG  540
YGAPFFVTRF REAMFFYSAH FDMLDATLPR DNDERLLIER DIIGRGALNV IACEGADRVE  600
RPETYRQWQA RNRRAGLRQL PLDPEVVGMV REKVREHYHK DFLVDVDHQW LLQGWKGRVL  660
YALSTWVAHD DS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-148GRAS family protein