PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG010900.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HB-other | ||||||||
Protein Properties | Length: 191aa MW: 22018.7 Da PI: 7.9117 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 67.5 | 1.7e-21 | 27 | 82 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r++ +++t+ q+++Le++F+++++p++++r+ L+++lgL+ rq+k+WFqNrR+++k TRIDC7BG010900.5 27 RKRYHRHTPRQIQTLEAMFKECPHPDEAQRANLSRELGLEARQIKFWFQNRRTQMK 82 688899***********************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MDFGDDQEGG SESNHHQQQQ QNQNQRRKRY HRHTPRQIQT LEAMFKECPH PDEAQRANLS 60 RELGLEARQI KFWFQNRRTQ MKAQHERQDN CFLRQENDKI RCENIAMREA LKNVICPTCG 120 GPPIAEDYFD EQKLRMENAR LKQELDQVAG LTAKYLGRPF TQLPQGTPQM NVSSLDLSMG 180 GVPIGGVPMG G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73360.1 | 2e-66 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG010900.5 |