PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7BG009120.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 480aa MW: 51217.9 Da PI: 4.5829

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG009120.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.3	2e-11	330	375	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR++i +++ +L++l+P++ K +K+++L + ++Y+k Lq TRIDC7BG009120.3 330 HSIAERLRREKISERMKNLQDLVPNS-----NKADKSSMLDEIIDYVKFLQ 375 99*********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MDYSNGSFFP SWSGNSASER YSFVDGSVES YAEEGSMPPT GYFRARSNQN LTFDEHEQNP 60 AIIANGCLPY NAQTDLLSGE ILSEDKPSNS LMELPQLQNN GSLQSNLIPP GTLQCTSTPG 120 TFDPQLDTPG LLELPHALSS SIESNGSEVS AFLADVHAVS SASTLCSTFQ NVPSYMEPVS 180 LEAFSFQGIQ NAPMFNNTSH SNGNLSVFDE ATMASLHDSK EFLSGSISSF GMAEQSQLAG 240 SGLKAEHQEQ NAMCNIPLPF ASGSQMAVSE AQGALNPSKI GSTIHNNKSE YPVPISHSAD 300 AQNKANSANG NSASAKPRAR ARRGQATDPH SIAERLRREK ISERMKNLQD LVPNSNKADK 360 SSMLDEIIDY VKFLQLQVKV LSMSRLGAPG AVLPLLAESQ TEGRSNSPLS SPTASQGLLD 420 AAGPEDSLVF EQEVIKLMET SITNAMQYLQ NKGLCLMPIA LASAISNQKG TSAAAIPPER

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MDYSNGSFFP SWSGNSASER YSFVDGSVES YAEEGSMPPT GYFRARSNQN LTFDEHEQNP  60
AIIANGCLPY NAQTDLLSGE ILSEDKPSNS LMELPQLQNN GSLQSNLIPP GTLQCTSTPG  120
TFDPQLDTPG LLELPHALSS SIESNGSEVS AFLADVHAVS SASTLCSTFQ NVPSYMEPVS  180
LEAFSFQGIQ NAPMFNNTSH SNGNLSVFDE ATMASLHDSK EFLSGSISSF GMAEQSQLAG  240
SGLKAEHQEQ NAMCNIPLPF ASGSQMAVSE AQGALNPSKI GSTIHNNKSE YPVPISHSAD  300
AQNKANSANG NSASAKPRAR ARRGQATDPH SIAERLRREK ISERMKNLQD LVPNSNKADK  360
SSMLDEIIDY VKFLQLQVKV LSMSRLGAPG AVLPLLAESQ TEGRSNSPLS SPTASQGLLD  420
AAGPEDSLVF EQEVIKLMET SITNAMQYLQ NKGLCLMPIA LASAISNQKG TSAAAIPPER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	4e-47	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG009120.3