PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG007460.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 395aa MW: 39410 Da PI: 6.3736

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG007460.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.3	4.8e-12	199	244	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq TRIDC7BG007460.4 199 HSIAERLRRERIAERMKSLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 244 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MAGGDGGGGG GAQDDFFDQM LSTLPSAWGD LGAGGKSPWE IAAGAEDLGA FDESTLPASR 60 LRQHQIGGEK LVMLQLTDLQ RQGLGGEESG GTGFSPLPLF ADRSPPQSRE EMDGGFKSPN 120 ACMQGGDHAL FNGFGVHGAG AAVQPPFGQG GSMSGQSFGG GPAASGGTTA PASSGGGGGA 180 APPRQTRVRA RRGQATDPHS IAERLRRERI AERMKSLQEL VPNANKTDKA SMLDEIIDYV 240 KFLQLQVKVL SMSRLGGAAG MAPLVASMSS EAKSSAKSSN GGGNSAAAAA AKANGGGESG 300 GGAGAGGLRV TEHQVAKMME EDMGTAMQYL QGKGLCLMPI SLASAISSAT TTTTSPASLL 360 ARQAVRPGAA AAALTSANGG GDDAPVRPVK VDAGA

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MAGGDGGGGG GAQDDFFDQM LSTLPSAWGD LGAGGKSPWE IAAGAEDLGA FDESTLPASR  60
LRQHQIGGEK LVMLQLTDLQ RQGLGGEESG GTGFSPLPLF ADRSPPQSRE EMDGGFKSPN  120
ACMQGGDHAL FNGFGVHGAG AAVQPPFGQG GSMSGQSFGG GPAASGGTTA PASSGGGGGA  180
APPRQTRVRA RRGQATDPHS IAERLRRERI AERMKSLQEL VPNANKTDKA SMLDEIIDYV  240
KFLQLQVKVL SMSRLGGAAG MAPLVASMSS EAKSSAKSSN GGGNSAAAAA AKANGGGESG  300
GGAGAGGLRV TEHQVAKMME EDMGTAMQYL QGKGLCLMPI SLASAISSAT TTTTSPASLL  360
ARQAVRPGAA AAALTSANGG GDDAPVRPVK VDAGA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	204	209	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	2e-44	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG007460.4