PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG007460.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 383aa MW: 40318.6 Da PI: 10.998

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG007460.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.4	4.6e-12	204	249	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq TRIDC7BG007460.1 204 HSIAERLRRERIAERMKSLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 249 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
RHPRARRMAG GDGGGGGGAQ DDFFDQMLST LPSAWGDLGA GGKSPWEIAA GAEDLGAFDE 60 STLPASRLRQ HQIGGEKLVM LQLTDLQRQG LGGEESGGTG FSPLPLFADR SPPQSREEMD 120 GGFKSPNGTG GDHALFNGFG VHGAGAAVQP PFGQGGSMSG QSFGGGPAAS GGTTAPASSG 180 GGGGAAPPRQ TRVRARRGQA TDPHSIAERL RRERIAERMK SLQELVPNAN KTDKASMLDE 240 IIDYVKFLQL QVKVLSMSRL GGAAGMAPLV ASMSSEVSNL TSSAGEEQRE EQQRRREQRG 300 GRGRQGERRR RERRWSRGRR ATGDGASGGQ DDGGGHGHGH AVPAGEGSLP HAHLPRLRHL 360 LRHHHHHLPG LAPHQTHHAH VRA

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

RHPRARRMAG GDGGGGGGAQ DDFFDQMLST LPSAWGDLGA GGKSPWEIAA GAEDLGAFDE  60
STLPASRLRQ HQIGGEKLVM LQLTDLQRQG LGGEESGGTG FSPLPLFADR SPPQSREEMD  120
GGFKSPNGTG GDHALFNGFG VHGAGAAVQP PFGQGGSMSG QSFGGGPAAS GGTTAPASSG  180
GGGGAAPPRQ TRVRARRGQA TDPHSIAERL RRERIAERMK SLQELVPNAN KTDKASMLDE  240
IIDYVKFLQL QVKVLSMSRL GGAAGMAPLV ASMSSEVSNL TSSAGEEQRE EQQRRREQRG  300
GRGRQGERRR RERRWSRGRR ATGDGASGGQ DDGGGHGHGH AVPAGEGSLP HAHLPRLRHL  360
LRHHHHHLPG LAPHQTHHAH VRA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	209	214	RLRRER
2	294	311	RRREQRGGRGRQGERRRR
3	307	312	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58010.1	6e-32	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG007460.1