PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7BG004490.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 439aa MW: 50034.4 Da PI: 8.816

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG004490.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.5	2.9e-20	60	146	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YAk GF v++++s++ +ng+ + tf Cs++gk+++++ + +++ + tgCkak+++++ dg+++++++ l+HnH+l+p TRIDC7BG004490.9 60 EYYNTYAKAKGFGVTRRSSNRD-DNGQLKYLTFSCSRYGKAQSNSGN---MLKPSRTVGTGCKAKINITRAPDGRFHLSTVILDHNHALSP 146 69*************99998.8889************9988...88999999****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
GIGGVQESSD MSISSDDDGI KQQRESNVEL AHDRAEAHPD GLLREPEVGM SFGTETEVRE 60 YYNTYAKAKG FGVTRRSSNR DDNGQLKYLT FSCSRYGKAQ SNSGNMLKPS RTVGTGCKAK 120 INITRAPDGR FHLSTVILDH NHALSPLKPR RFRCNKKLDF RVKRRLELND PAEIRVNKSS 180 TIPRVTHFDI EKQFQSAYTN SKFKEFQEEL TQTMYCDRKL MQKEGAIETY EITEDVLIDE 240 DKGWRKDIVH HVYFSEEEFE VKCSCRRFEF TGILCRHVLC VLTHKKIKEV PPQYVLDRSK 300 KNVNRKHNFI RCTYGGMEDT PAAERFDRLC NSFYPVAEIG SMSDDSCNAL IEELRTLKIR 360 FSSNSSSENG KEHVATREDA HSNGKTTSKN IPSPIAVRCA GCPPSLRKES MLDKLICQAS 420 EKKKEAEQKA SSTNLNKKR

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

GIGGVQESSD MSISSDDDGI KQQRESNVEL AHDRAEAHPD GLLREPEVGM SFGTETEVRE  60
YYNTYAKAKG FGVTRRSSNR DDNGQLKYLT FSCSRYGKAQ SNSGNMLKPS RTVGTGCKAK  120
INITRAPDGR FHLSTVILDH NHALSPLKPR RFRCNKKLDF RVKRRLELND PAEIRVNKSS  180
TIPRVTHFDI EKQFQSAYTN SKFKEFQEEL TQTMYCDRKL MQKEGAIETY EITEDVLIDE  240
DKGWRKDIVH HVYFSEEEFE VKCSCRRFEF TGILCRHVLC VLTHKKIKEV PPQYVLDRSK  300
KNVNRKHNFI RCTYGGMEDT PAAERFDRLC NSFYPVAEIG SMSDDSCNAL IEELRTLKIR  360
FSSNSSSENG KEHVATREDA HSNGKTTSKN IPSPIAVRCA GCPPSLRKES MLDKLICQAS  420
EKKKEAEQKA SSTNLNKKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	150	166	RRFRCNKKLDFRVKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	8e-18	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG004490.9