PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7BG004490.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 514aa MW: 58507.1 Da PI: 7.7477

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG004490.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.6	2.8e-20	77	163	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YAk GF v++++s++ +ng+ + tf Cs++gk+++++ + +++ + tgCkak+++++ dg+++++++ l+HnH+l+p TRIDC7BG004490.4 77 EYYNTYAKAKGFGVTRRSSHRD-DNGQLKYLTFSCSRYGKAQSNSGN---MLKPSRTAGTGCKAKINITRAPDGRFHLSTVILDHNHTLSP 163 69*************99998.8899************9988...88999999****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
GWTVDELEDT ELGGMDDGIS GFQESSDMSI SSDGDGIKQR KESNVELAHG LAEAQSDGSL 60 GEPEVGMTFD TENEVREYYN TYAKAKGFGV TRRSSHRDDN GQLKYLTFSC SRYGKAQSNS 120 GNMLKPSRTA GTGCKAKINI TRAPDGRFHL STVILDHNHT LSPPKPRRFR CNKKLDFCVK 180 RSLELNDPAE IRVSKSSTIP RVTHFDIEKQ FQSAYTNLRF KEFQEELTQT MYCDRKLMQK 240 EGAIEMYEIT EDVLIDEDKG WRKDIVHHVY FSEEEFEVKC SCRRFEFTGI LCRHVLCVLT 300 HKKIKEVPPQ YVFDRWKKNV NRKHNFIRCT YGGMEDTLAA ERFDRLCNSF YPVAEIGAMS 360 DDSCNALMEE LHTLKIRFSS NSSSENGKEH VATREDAPLN GKTTSKTTPS PIAVRCARCP 420 PSPRKQSMLD KLICQANEKK KEAEQKASST NLNKKRPRKN RKSSVDDILE QHVMEHSVCN 480 LVLSCSIIYF HVFSKLTVLH SETESATCLF GWPS

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

GWTVDELEDT ELGGMDDGIS GFQESSDMSI SSDGDGIKQR KESNVELAHG LAEAQSDGSL  60
GEPEVGMTFD TENEVREYYN TYAKAKGFGV TRRSSHRDDN GQLKYLTFSC SRYGKAQSNS  120
GNMLKPSRTA GTGCKAKINI TRAPDGRFHL STVILDHNHT LSPPKPRRFR CNKKLDFCVK  180
RSLELNDPAE IRVSKSSTIP RVTHFDIEKQ FQSAYTNLRF KEFQEELTQT MYCDRKLMQK  240
EGAIEMYEIT EDVLIDEDKG WRKDIVHHVY FSEEEFEVKC SCRRFEFTGI LCRHVLCVLT  300
HKKIKEVPPQ YVFDRWKKNV NRKHNFIRCT YGGMEDTLAA ERFDRLCNSF YPVAEIGAMS  360
DDSCNALMEE LHTLKIRFSS NSSSENGKEH VATREDAPLN GKTTSKTTPS PIAVRCARCP  420
PSPRKQSMLD KLICQANEKK KEAEQKASST NLNKKRPRKN RKSSVDDILE QHVMEHSVCN  480
LVLSCSIIYF HVFSKLTVLH SETESATCLF GWPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	2e-18	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG004490.4